Nibribacter ruber: GU926_04115
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Entry
GU926_04115 CDS
T06388
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
nib
Nibribacter ruber
Pathway
nib00500
Starch and sucrose metabolism
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
GU926_04115
Enzymes [BR:
nib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
GU926_04115
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Por_Secre_tail
CBM_20
AMPK1_CBM
DUF5115
CBM_48
DUF3459
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
QHL86666
UniProt:
A0A6P1NS58
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Position
complement(962024..964555)
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AA seq
843 aa
AA seq
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MHAQQVQLTFRVDMSQQTVSPNGVHVAGSFQSESGVGADWNPATSVMTDADKDNVYELTV
NVPAGVYEYKFINGSTWLAPQPELVPAACGMEDGAGNVNRQVTVGASNVRLPVVSFGSCT
TQITFAVDMSQQTVASGGVYVMGNFQALAGYGADWNPGSIPVQDPEGDGVYTVNVALPAG
GLFQYKFVNGSSTSGAEQVPSACGVSGGEGVWNRTLDATTSVKTPSFLFGSCATSGNVPV
NADYPTFWWNDAVFYEIFVRSFYDSNGDGKGDFKGLIQKLDYLNDGNPATTTDLGITGIW
LMPMMESPSYHGYDVTNYYATESDYGTMADFEEFLAAAHARGIKVIIDFVMNHSSDQHPW
FQQSSSSTTNSFRDWYIWSDTNPGTIGPWGQGVWHQKNGKYYYGIFYSGMPDLNWSNPQL
KSSMWEITRFWLNKGVDGYRIDAVKYLDEDGPKLESTPETFSLLQEFHQEVKKSNPDAFT
VGEAWSNTSAVVPYVQDNRLDMAFEFDLASAIINSVKNTNPAGLRNQLNLVNRLYPKLQY
ATFLTNHDQNRVMDELGANLAQMKQAAALYLTMPGVPFLYYGEEVGMLGSGVDEDKRKPM
QWTNGAKSGFTTGTPWRALNSNFAQFNVQTLAADPSSLLNYYKTLIHTRNAQPTLRKGYY
AEVTAGNASLMSYGRVYEQEASLIVSNLGSDALLNPSISMSVSTLQAGTYQVRELIGDRA
VGSVTINEQGGFSNWQIPGPLAADQTWILLLTRGTTTGIKEEPHLETTLFPNPAADNVTL
TLQNPPKSSNQLLVYDVTGKLMTKTSFKGQSITLNTRSWANGTYFLKIQSEGLVTMKRLI
VAH
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgctcaacaagtacagctcaccttcagagtggacatgagccagcagactgtatca
ccaaatggggtgcatgtggcaggttcatttcaatctgaatctggggtaggggcagactgg
aacccggctacttctgtaatgaccgatgccgataaagacaatgtctatgaactgacggtg
aatgttccggctggtgtgtatgagtataaattcatcaatggtagtacctggctggcgccg
cagccggagttggtgccagctgcctgcggcatggaggatggagctgggaatgtaaacagg
caggtgacggtaggagctagtaacgtacgactaccagtggtgagtttcggttcttgtaca
acacagataacctttgccgtagacatgagccagcaaacggtagctagtggcggcgtgtac
gtaatgggcaactttcaggctctggctgggtacggcgcagactggaaccctggttctatt
ccagtgcaagacccagaaggggacggagtgtacacggtgaacgtagcattaccagcgggc
ggactctttcaatacaaattcgttaatggctcctccacatctggcgcagagcaggttccc
agcgcctgcggagtgtctggcggggaaggagtttggaaccgcacgttagatgccaccacc
tcggtgaagacgccaagctttctttttgggtcttgtgccacttcaggaaacgtgcccgtc
aacgctgactatcctaccttttggtggaatgatgcggtcttctatgaaatctttgtaaga
agcttctatgacagtaacggcgacggaaaaggcgattttaaagggcttattcaaaagtta
gattacctaaacgatggcaatcctgccaccactacagacctgggcataaccggtatttgg
ctcatgcccatgatggaatcgcctagctatcacgggtatgatgtgaccaactactacgcc
accgaatcagattatggcactatggccgattttgaagaatttctggcggccgctcatgcc
cgtggcatcaaagtaatcattgatttcgtgatgaaccactcctcagaccagcacccttgg
tttcagcagtccagcagcagcaccacaaacagcttccgggactggtacatctggtcagat
accaatccgggcacaattgggccttgggggcaaggagtatggcatcagaaaaacgggaag
tattactatggtattttctatagtggcatgccagacttaaattggagcaacccccagctg
aagagttctatgtgggagattactcgtttttggctgaacaaaggcgtggacggttaccgg
attgatgccgtcaaatatttagacgaagacggcccgaaacttgaaagcacccctgagacc
ttcagccttttgcaagagtttcaccaggaagtaaaaaagtccaacccagacgcttttacg
gtaggcgaagcctggtctaatacttcggccgtggttccttatgtacaagacaacaggctg
gacatggcgtttgaatttgacttggcgtcagcgattatcaattcggtgaaaaataccaat
ccggcgggcttgcggaatcaattgaacctggtcaaccggctttacccaaaactccagtat
gccacgtttctaaccaaccatgatcaaaaccgcgtcatggacgagctaggtgccaacctg
gcccaaatgaaacaagcggcagccttgtacttgaccatgccgggcgttcccttcctgtat
tacggcgaagaggtaggcatgctgggttctggtgtagatgaagacaaacgcaaaccaatg
cagtggaccaatggagctaagtctggttttaccaccggcactccgtggcgtgcgcttaac
tccaatttcgcgcagttcaatgtgcagactctagccgctgatcccagctcgctgcttaac
tattacaagaccttaatccataccagaaacgcacaacccactctccgcaaaggctattat
gcagaggtaacagccggcaatgcctccttgatgagttatggacgggtatatgagcaggag
gcgtccctcattgtgtctaatttgggaagtgatgccttgctaaaccccagcatttccatg
tcggtgtctaccttgcaggctggtacttatcaggtaagggagcttataggtgaccgggcg
gtggggagtgttaccatcaatgaacaaggtggcttttccaattggcaaataccgggtcct
ttggccgcagaccagacctggattttgcttttaacgaggggtaccaccactggtattaaa
gaagaacctcacctagaaaccaccttgtttcccaacccagcggcagacaacgttacgctc
actttgcagaatcctcccaaaagcagtaaccaattgctggtgtatgatgtgaccggaaag
ctaatgaccaaaaccagcttcaaaggccaatctattactttgaatacccgttcctgggcc
aatggtacctacttcctgaaaatacaatcagaaggactggtgaccatgaagagactaata
gttgcccactaa
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