Nitrosarchaeum sp. AC2: DSQ20_06850
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Entry
DSQ20_06850 CDS
T06694
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSQ20_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nic03400
]
DSQ20_06850
DNA repair and recombination proteins [BR:
nic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSQ20_06850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSQ20_06850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
DEAD
ResIII
AAA_30
Met_synt_B12
P-loop_SecA
UB2H
Tup_N
Motif
Other DBs
NCBI-ProteinID:
QLH11205
UniProt:
A0A7D5MAQ2
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Position
complement(1161968..1163920)
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AA seq
650 aa
AA seq
DB search
MQQIHKFELVSEYEPTGDQPQAIDTLVSGVKKGTVQTLLGVTGSGKTFSIANVIARTGKN
TLVISHNKTLAAQLYSELKQFFPKNNVGYFVSYYDYYQPESYLPQTDTYIEKDTQINEKI
EKLRLEATAMLLSGEPTIIVSTVSCIYSLGNPKDWEDLAITINAGDVIKRNDLIKKFIDA
RYERNNTEVAPGNFRVKGDTIDIIPAYSEDIVRISMFGDDVEKITLLDHISLKEKRTITQ
MKIFPAKHYLIAKDVREKAIISIKNELKQRLPELNELEKQRLEMRTKYDLEMIEELGYCS
GIENYSRHFDGRKAGEKAFCLMDFFGDDYLLVIDESHVTLPQLHGMYKGDYSRKQQLVTY
GFRLPSAYDNRPLKFEEFENYLKNTIFVSATPSDYEKKISSQIAEQLVRPTGLLDPVVEI
RSTKDQMDDLIQEIAKRSVKNERVLVTTLTKRMAEDLAEYLSKKQVRVRYMHSEIEGLQR
TELIRQLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNFTSLIQTFGRAARN
ENGTVIMYADTITKSMSNAIYETKRRKEKQIQFNKEHNITPKTIIKSVPEQVTTLDESKL
KSTHDLATDIIELEYQMKKYSEELDFERAIECRDRIKRLEKEIKFKDGRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaaatccataaatttgaacttgtatctgaatatgagcctacaggtgatcaacct
caagctattgacactttagtttcaggtgtaaaaaaaggaacggttcagacactattaggt
gtaacaggaagtggaaagacattttcaattgcaaatgtaattgcaagaactggaaagaac
acactagtaatttctcacaataagactttggctgcacaactttattctgaactaaaacag
ttttttccaaaaaacaatgttggatattttgtatcatactatgattactatcagcctgaa
agttatctgcctcagaccgatacatatattgaaaaagacactcagattaatgaaaaaatt
gaaaaactgcgtttagaggcaactgcaatgcttctatctggcgagcctacaattattgta
tctaccgtatcttgtatttactcacttggtaatcccaaagattgggaggatttagcaatt
acaattaatgctggtgatgttataaaaagaaatgatcttataaaaaaattcattgatgca
cgatatgaaagaaataatactgaagtggctcctggaaattttagagtaaaaggtgatact
atagatatcattcctgcatattctgaagatattgttcgaatttcaatgtttggtgatgat
gtagaaaaaataactttgttagatcatatctcgcttaaagaaaaacgtaccataactcag
atgaaaatatttccggccaaacattacttgatagcaaaagatgttagagaaaaggctatc
atctcaatcaaaaatgaactaaaacaaagattgcctgaactcaacgaactagaaaaacaa
cgattagagatgagaacaaaatatgatctagaaatgattgaagaattaggttattgttca
ggaattgaaaattattcaagacattttgatggaagaaaagctggtgagaaagcattttgc
ctgatggatttttttggtgatgattatttgcttgttattgatgaatcacatgttacattg
ccacaactacatggaatgtacaaaggtgattattcaagaaaacaacaactagtaacatat
ggttttcgcttacctagtgcatatgataacagaccattaaaatttgaagaatttgaaaat
tatctaaaaaatactatttttgtttctgcaactcccagtgattatgagaaaaaaatatct
tcacaaattgccgaacaactagtacgaccaactggtctattagaccctgttgtagaaatt
agatctactaaagatcaaatggatgatttaatccaggaaattgctaaaagatccgtcaaa
aatgaacgcgttttagtcacaactttgacaaaacgtatggctgaagacctagctgagtac
ctctccaaaaagcaagttagagtaagatacatgcactctgaaatcgagggattacaaagg
acagaacttattcgacaactacgattaggtgaatttgatgttctagttggaattaatttg
ttacgagaaggattggatatccctgaagtttccctcgttgcaatacttgatgcagacaag
gaaggattcctcagaaattttactagtttaattcaaacttttggaagagcggcaagaaat
gaaaatggaacagtaatcatgtatgctgatactattacaaaatccatgtctaatgcaata
tatgaaactaaaaggcgtaaagaaaaacaaatacaattcaataaagaacacaacatcact
cccaagactatcataaagtcagttcctgaacaagttacaacattagatgaatctaaactg
aaatcaactcatgatcttgctactgatattatagagttagaataccaaatgaaaaaatat
tctgaagaattagattttgagcgagcaattgaatgtcgagatagaataaaaagactggaa
aaagagatcaaatttaaagatggcagaaaataa
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