Nocardia iowensis: KV110_17895
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Entry
KV110_17895 CDS
T07470
Name
(GenBank) relaxase domain-containing protein
Organism
nie
Nocardia iowensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
DEAD
UvrD_C_2
GP46
Motif
Other DBs
NCBI-ProteinID:
QXN95613
LinkDB
All DBs
Position
complement(3882412..3888369)
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AA seq
1985 aa
AA seq
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MAGNGYQYYLRTVAANDVSSRGRSDLADYYSAHGEAPGRWHGSGLAALGLAADDEVTEAQ
MDALFGLGRHPNAAVIEERVYDEQIRLGAKHKDAGRAADKASRLGNPYRVYTEVSEFRKR
CAKAFERHNISNGLDPDDAIPDADRSRIRTHVAFDMFTETYDRPPVDARELSGWVAKNSR
PNSTAIAGFGITFSPVKSVSVLWAVAPRAVSEKIEAAQRAAVEDALRWLERHGIFTRLGR
NGIRQVDVEGIVAAVFTHRDSRAGDPDLHTHVLMANRVRTLDGKWRTLDGAAIYAALVTV
SEIYNTRLEHHLQRLVGVEFTERPGQDPSKRAIREIVGIPAGLITAWSRRDTAITTRLGE
LAAQFQAWLGREPTPGEMFDLAERATLDTRPAKHLLRSLAQQRSTWRAEAVGLLGSREAL
SHMVSVALNPIRTPRPQITGQWITRTAERVIEVVAEQRATWRATNLRAEIERQLRGQVSG
QDWERVAEAVLAETISPIHTVAQHDPDLAEEPQLRSVPVLLRRRDGTSVYTSANQQLYTS
ARTLSVEQQLIDLSVKTGGRHVAPDIVAAAISSYNATSPDRPLNAGQISVIEGFAQSDLR
VRTTNAPAGSGKTTAMSVLAEAWAASGGQVLGLAPTAAAAAVLGESIHKRVETVDKVLDV
LTNHTPGPDNPALDREYPPSLPQWVLDIDPDTLVIVDEHVKLGNLKRLRLLRFLSDRGAT
IRCIGDPSQLASIEAGGADADMDAAAPEPTLTLTHVVRFDSTGEATASLQLREGDPAALG
WYLDNGRIHGGHEGATHDDAFTAWTADYLAGRDTIMLAANHTVVTELNARARADRLARAG
GSVGETCVLVDNLQASVGDTIRTRRNNPRLRLGAYDWVRNGYAWTVTTVHDDGSLTATHQ
RPGGKHGHSVRLPADYVAEHVRLGYATTIDSAQGITAQTCHVALTGHESLQQLYVALTRG
IYANHVYVPTALDGSEASFWSEPAVYPRTAVEILLRVFGRDGAQKSAHTMLRDALDPHRR
IGRALDTYLDSIGVAAENALGPEGLDRLHADAEALVAHLTDYPAYPVLRQHLAMIALSGR
DPIEALRTAKNARELDTADDVAAVLDWRLDPTGAHSTGHGPLPWAAGIPAGLDTERDSTQ
LAARARIVADLAAQIRTDARTWTPASAPRWARPLIGANSKLVEDLAVWRASLHIEDRDLR
PTGPRRRVVLERDHQQLLDLRVTDTLGDPDRPANTWASIVENIAVRVTTDPWWPVLADKI
ETAHRAGIDIETRLTEAAHARPLPDEMPAAALWSRLELEPSALDTHTNTLRPDWIADLHT
VLGDSIAERIVADPAWPRLVAAIDRTTGSDWTPYDLLTTAHELILGAQPDGATSLRPDQL
VSALAWRIDALLRKPTQPQSTPTEPDPDITMHPHDIPPEPQQPDTSRDDITATPAPRPPS
QQANADSRTVPPDGVATVAALFRSGDIAAARRAFHTLGQRLTDEQRFILERVGTTLYRYP
FVNAVARLRWAAEQYPEHRDLITACTPDSDPHAYQPTPMHPTRRPPRDQGAVPAQDHPDQ
FDPARTRRPLASDAEIAAAQQHQDYTDTRGDVDDDPKYWPIPRGVDHPYYIAKHHRDRIM
NGPEYGEDDPDHDRITVRNTRDLPCVACGLGRATNEARPIPPRRSDDGLCGECRDDNRLP
IPDHDPTDRIRTRCDHLAATHPPETIRGLLRRDWHAARTLAERLAISTWAENHLRPEASQ
LDIPTDPIEQNPLTTYTDTQLQQHIDHLELRITLIDDDATLYDPAPEPPSDDTEYDQLLH
RHHTVQEAIRTARTTENALGQAVRDLHALTTEIETARARLDATPGYRRSARHDIQARVDA
LLTQQQNATRTRESARTTARDARREATLHAGPADQWDQILAAPPPQRTYYQPTTASDSAT
DQQDQIADYQAQLERLRTEQQRRTALTAAQRTHEQQRQQSATQEDGTVEFTDYALPHQPD
TDIGL
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggcaatgggtatcaatattatctgcgcactgtcgccgcgaacgatgtctcttct
cgtggccgttccgatctcgctgactattactccgcgcatggggaagctccggggcgctgg
cacggctcgggtttggccgcgctcggcctcgccgctgacgacgaggtcaccgaagcgcag
atggacgcgctgttcgggttgggtcgccatcccaacgcggcggtgatcgaagaacgcgtc
tacgacgagcagatccggctcggcgcgaaacacaaggacgcgggccgagccgccgacaaa
gcgtcacgtttaggtaatccatatcgggtctataccgaggtttccgagttccggaaacgg
tgcgcgaaggcgttcgagcgacacaatatctcgaacggattggaccccgacgacgctatt
cctgatgcggatcggtcgcggattcgtacccatgtcgcgttcgatatgttcaccgaaacc
tacgaccggccgccagttgatgcgcgggagttgtcggggtgggtggcgaagaactcgcgt
ccgaactccaccgcgattgcgggtttcggcatcactttctcgccggtgaagtcggtgtcg
gtgctgtgggcagtggcaccgcgggcggtgtcggagaagatcgaggccgcccaacgcgcc
gccgtagaggatgcgttgcgatggctcgagcgccacgggatcttcactcgattgggccga
aacgggattcgccaggtcgacgtagaggggatcgtcgcggcggttttcactcatcgtgac
agccgcgccggggatccggacctgcacactcatgtgctgatggcgaacagggtgcgcacg
ctggatggaaagtggcgcaccctcgacggagccgcgatctatgcagcgttggtaacggtg
tcggagatctacaacacccgcctcgagcatcacctccaacggctggtcggtgtggagttc
actgaacgtcccggacaagacccctccaagcgagcgattcgggaaatcgtcggcatcccg
gctggattgatcaccgcgtggtcgcggcgtgataccgcgatcaccactcgccttggcgag
cttgccgcgcagttccaagcctggctcggccgtgaaccgacaccgggggaaatgttcgat
ctcgctgagcgcgccaccctggacacccgccccgccaagcacctgctgcggtccttggca
cagcagcgcagcacctggcgcgcggaggccgtggggctgctcgggagtcgagaagcgttg
tcgcacatggtgagcgtggcgttgaatccgatccgcacgccgcgcccgcagatcaccggg
cagtggatcacccgcaccgccgagcgcgtcatcgaggtcgtggccgagcagcgcgccacc
tggcgggcaaccaacctgcgcgccgaaatcgaacgccaactgcgcggacaggtgtccggg
caggactgggaacgcgtcgccgaggccgtgctcgccgagaccatctcccccattcacacg
gtcgcccaacacgatcccgatctcgctgaggaaccccaactccgctctgtcccagtcctg
ctccggcgccgcgacggcaccagcgtctacacctcggccaaccaacagctctacacctcg
gcccgcacactctcggtcgaacagcaactgatcgacctctccgtgaagaccggtggacgg
cacgtggcgccggatatcgttgctgccgcgatctccagctacaacgcaacaagccctgat
cggccgctgaatgccgggcagatcagtgtgatcgagggcttcgcccagtccgatttaagg
gtccgcaccaccaacgcgccagcgggttcgggcaagaccaccgcgatgtcggtgctcgcc
gaggcgtgggcggccagtggtggtcaagttctcggtctggccccgactgcggccgcagcc
gcggtgctcggtgagtcgatccacaagcgggtggagaccgtcgacaaggtcctcgacgtc
ctgaccaaccacacgcctggtcccgacaaccctgccctggaccgtgagtatccgccgtcg
ttgccgcaatgggttctcgatatcgaccccgacacgttggtgatcgtcgacgagcacgtc
aaactcggcaacctcaaacgccttcgcctcctgcgtttcctgtccgatcgcggcgcgacg
atccgctgtatcggcgacccaagccagctcgcctcgatcgaagccggcggcgctgatgcc
gacatggacgccgcagcccccgaacccacgctcaccctgacccatgtggtgcgcttcgac
tccaccggtgaagcaaccgcgagtctgcagctgcgcgagggcgatccggccgcgttgggc
tggtatctggacaacggccgcatccacggcggacacgaaggcgccacccacgacgacgcc
ttcaccgcctggaccgccgactatctcgccggccgcgacaccatcatgctcgccgccaac
cacaccgtcgtcaccgaactcaatgcccgcgcccgcgccgaccgcctcgcccgcgcaggc
ggatccgtgggcgaaacctgcgttctcgtcgacaatctgcaggcatcggtcggtgacacg
atccgcacccgacgcaacaatcctcggctgcgattaggtgcttatgactgggtgcgtaac
ggctacgcctggaccgtcaccacggtccatgacgacggcagtctcaccgccacccatcaa
cgacctggtgggaaacacggtcatagtgtgcggctgcccgccgactacgtcgccgaacat
gtgcgcctcggctatgcgacgacgatcgattccgcgcaaggaatcaccgcccaaacctgc
cacgtcgcactcaccggacacgaatccctgcaacagctctacgtcgcactcacccgcggc
atctacgccaatcatgtctacgtgccgaccgcgttggacggttcggaagcctcgttctgg
tccgagccagcggtctatccgcgcaccgccgtggagattctgttgcgcgttttcgggcga
gatggggcgcagaagtcggcgcacacgatgctgcgtgacgcgctcgacccgcaccggcgc
atcggtcgcgcgctcgatacctatctcgactcgatcggtgtcgccgccgaaaacgcgctc
ggtcccgagggtctcgatcgcctccacgccgacgccgaggcgctcgttgcgcatctcacc
gactaccccgcctacccagttctgcgccagcatctggcgatgatcgccctgtccggtcgc
gacccgatcgaggcgttacgcaccgcgaagaacgcccgcgaactcgacaccgccgacgat
gtcgccgccgtgctggactggcgcctggacccgaccggtgcccactccaccggccacgga
ccacttccctgggccgccggaatccctgctggactcgacaccgaacgcgactccacacag
ctcgctgcccgcgcacgtatcgtcgccgatctcgccgcccagatccgcaccgacgcccgg
acatggactcccgcgtcggcgccacggtgggcgcgaccgctcatcggcgcgaactcgaag
ctggttgaagatctcgcggtgtggcgagcgtcgctgcatatcgaggatcgagacttgcgt
ccgaccggaccgcgacgccgcgttgtgctcgaacgagaccaccagcaactgctcgacctt
cgcgtcaccgacaccctcggcgacccggaccgcccggccaatacctgggcatccatcgtt
gagaacatcgcggtccgtgtcacgaccgacccgtggtggccggtcctcgccgacaagatc
gagaccgcgcaccgcgccggaatcgacatcgaaactcgcctaaccgaggccgcacacgct
cggccgttgccggatgagatgcccgctgccgcgctgtggtcgcgcctggaactcgaaccc
tccgccctcgacacgcacaccaacaccctgcgcccggactggatcgccgacttgcacacc
gtgctcggcgactcgatcgccgaacgcatcgtggccgaccctgcgtggccgcggctggtc
gccgcgatcgaccgcaccaccggcagcgactggacaccctacgacctgctcaccaccgca
cacgaactcatccttggtgcccaacccgacggcgccaccagcctgcgtcccgaccagctc
gtgagcgcgttggcatggcgcatagatgccctccttcgcaaacccacccaaccccaatca
acgcccaccgaacccgatccggacatcaccatgcacccacacgacattccgcccgagccc
caacagcccgatacgtcccgcgatgacatcacggcaacgccagcaccacgaccaccaagc
cagcaagccaacgccgactcccgaaccgtgcctcccgacggcgtcgcaacggtcgcagcg
ttgttcagatccggcgatatcgccgcggccaggcgcgcctttcacacgctcggccagagg
ctcaccgatgagcagcgcttcatcctcgaacgcgtcggcaccaccctctaccgctatccc
ttcgtcaatgctgtcgcgcgattgcggtgggccgccgagcaatacccagaacaccgcgac
ctcatcaccgcctgtacccccgacagcgacccgcacgcctaccaacccacccctatgcac
cccacgagacggccacctcgtgatcagggcgccgttcccgcgcaagaccatcccgatcaa
ttcgaccccgcacgcacacgacgcccgctcgcctctgacgctgaaatcgctgccgcgcaa
caacatcaggactacaccgacacccgcggcgacgtcgacgacgatccaaaatactggccg
atcccccgcggggtcgaccacccctattacatcgcgaagcaccaccgggaccgcatcatg
aacggacccgaatacggcgaagacgaccccgaccacgatcgcatcaccgtccgcaacacc
cgcgacctgccctgtgtggcctgcgggctcggccgcgccaccaacgaagcccgcccgata
ccaccccggcgcagcgacgacggtctatgcggagaatgccgcgacgacaaccgcctcccc
atccccgaccacgatcccaccgaccgtatccgcacccgctgcgaccacctcgccgccacc
catccacccgagacgatccgtggcctgctccgccgcgactggcacgccgcccgcaccctc
gccgaacgcctcgccatcagcacctgggccgaaaaccacctacgccccgaagccagtcaa
ctcgacattccgactgacccgatcgaacaaaacccgctgaccacatacaccgacacccaa
ctccagcaacacatcgaccacctcgaactacgcatcaccctcatcgacgacgacgccacc
ctctacgaccccgcccccgaaccgcccagtgatgacaccgaatacgaccagcttcttcac
cgccaccacacagttcaggaagcgatccgaaccgcccgcaccaccgagaacgcactcggg
caagccgtccgcgacctgcacgcactcaccaccgaaatcgagactgcccgcgcacgtctg
gacgccacacctggttaccgtcgcagcgcacgacacgacatccaggcccgcgtcgatgca
ctgctgacccagcagcaaaacgccacccgcacccgagaatcggcccgcaccaccgcccgc
gacgcccgacgcgaagccaccctccacgccggccccgccgaccaatgggaccaaatcctg
gccgccccaccgccacaacgcacctactaccaacccaccacagccagcgactccgccact
gaccagcaagaccagatcgccgactaccaagcccaactcgagcgactccgcaccgaacaa
cagcgacgcaccgcactcactgcggcccagcggacacacgaacaacagcgacagcaatcc
gctactcaggaggacggcacggtcgagttcaccgactatgcgctcccgcaccagcccgac
accgacatcgggctgtga
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