Nitrospira sp. KM1: W02_08130
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Entry
W02_08130 CDS
T08344
Symbol
hemD
Name
(GenBank) Porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00860
Porphyrin metabolism
nif01100
Metabolic pathways
nif01110
Biosynthesis of secondary metabolites
nif01120
Microbial metabolism in diverse environments
nif01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
W02_08130 (hemD)
Enzymes [BR:
nif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
W02_08130 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
W02_08130 (hemD)
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GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
BCA53673
UniProt:
A0A679HRZ6
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Position
complement(851273..852832)
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AA seq
519 aa
AA seq
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MTKSNRGKVFLVGAGPGDPGLLTLKGKACLEQADIVLYDHLANPALLRHARESAERVYVG
RRGRGQYQNQDDINKVMIERARAGQVVVRLKGGDPFVFGRGGEEAEAVAEAQIDFEVVPG
VTAAVAVPAYAGIPVTHRTMASTVTIVTGHEDPSKPSPVMDWPKLAATSGTLVFMMGMKT
LPAIVSRLLQEGRASDTPVAAIRWGTRAEQQTVIGSLRDIVAKAERARFEPPTVIIVGNV
VKLREQLNWFERRPLFGKRVLLTRPKEQAHEFARLLTAFGAETIEVPVIQIIPPPTWTIV
DQAISRLQAYHWLIVTSVNGVRPFMDRLRAAGKDVRALGHLRICAIGPRTADALATYGLT
ADLIPAEYQAEGILASLSEQEMKGKRILIPRAEIAREILPQQLSQMGAQVDVVPVYRTIA
PGEDANPLAPLFEDRKVDVVTFTSSSTVRNFVELIGGRDEARRLTVNAIVGCIGPVTAQT
AEECGLTVTIMPPENTVPALAEAIVKYFAEGARVAVSGA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaatcgaatcgcgggaaagtgtttttggtaggtgcggggcccggggatcccggt
ctgctgacactcaagggcaaggcgtgtttggagcaggcggatatcgttctctatgatcac
ctcgccaatcctgcgctgctgcggcatgctcgggaatctgccgagcgcgtctatgtcggc
cgccgtgggagggggcaatatcaaaatcaggatgatatcaataaagtcatgatcgaacgg
gcgagggccggccaagtcgtggtccgtctgaagggcggagatccgtttgtgttcggacgg
ggcggggaggaagcggaagccgtagcggaagcgcagatcgattttgaagttgttccaggt
gtgacggctgcggtggccgttccggcctacgccggaattccggtcacccatcgcacgatg
gcttcgacggtgaccatcgtcaccggtcatgaggatccgtcgaaaccctctccggttatg
gactggccaaagcttgcagcaacgtcaggcaccttggttttcatgatgggaatgaagaca
ctgccggctatcgtgtctcggctgcttcaggaaggcagggcctccgatacgccggtcgcc
gccatccgctggggaacgcgagccgaacagcagacggtgatcggttcactgcgcgatatc
gtcgcgaaagccgaacgagcgagattcgagcctccgacggtcatcattgtcggcaacgtc
gtcaaactcagagaacagttgaattggttcgaaagacggccgctgtttggtaagcgcgtg
cttttgaccagaccgaaggagcaagcacatgagtttgctcggcttctgacagcattcggc
gctgagactatcgaagtcccggtcattcagatcattccgccgccaacctggaccattgtc
gaccaggctatttcccggttgcaggcgtaccattggcttatcgtcaccagtgtcaatggg
gtgagaccgttcatggatcggctgcgagccgctgggaaggacgtacgggctctgggccat
cttcgcatttgtgcaatcggcccccgcaccgccgatgcgctcgcgacatatggtctgacc
gcggatctcatcccggcagagtaccaagctgaagggattctcgcctcattgtcggagcag
gagatgaaagggaagcgcattttgattccacgtgcggaaattgcgagagaaattctcccg
cagcagctgagccagatgggtgctcaagtggatgtggttcccgtttaccgtacgattgca
ccaggcgaggacgcgaatccactcgctccgctttttgaagatcgaaaggtggacgtcgtc
acctttaccagttcgtcgacagtccgaaacttcgtggaactgatcgggggacgggacgaa
gcacggcggttgactgtgaacgccattgtcggctgcatcggaccagtcaccgcacagact
gcggaggagtgcggtctcacagtgacgatcatgccgccagaaaataccgtgcctgcattg
gcggaagcgatcgtgaaatatttcgctgaaggagctcgtgtggcggtgtcaggtgcgtga
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