Nitrospira sp. KM1: W02_34160
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Entry
W02_34160 CDS
T08344
Symbol
lig
Name
(GenBank) putative DNA ligase
Organism
nif
Nitrospira sp. KM1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BCA56276
UniProt:
A0A679HZ97
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Position
complement(3566772..3568307)
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AA seq
511 aa
AA seq
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MQLARLVETVQRVRATTKKSEKIRLLAECLGQVNGREAVLAALYLTGSLPQGKIGIGWSV
IQKAMHDAPASGEPLMLSDVDRLMDVLAAERGAGSMDRRILALSNLFSRANPQERTFLSQ
LLIGEVRQGALEAVLLDAIAAAAGLPAAEVRQAFMFAPNIGDLAQAALEEQSAGLARFSM
RLFVPVAPMLANSAEDVDEALQRLDRAVFEYKLDGARVQVHKGGDDVRVFTRQLQDITGR
LPEIVEWARNLPVREAVLDGEAIALRPDGRPQPFQTTMRRLGRIKDVAAMRESIPLSPFA
FDALYLDGSSLLTQSYEERLRALATMTPAELIPHVVTSQPEEARRFLAQSLAAGHEGVMA
KSPTAPYVAGQRGYHWLKLKEATSLDLVILAAEWGNGRREGWLSNLHLGARDPSSGHFVM
LGKTFKGLTDEMLRQQTEQLLSLETHREEHTVFVKHQMVVEIAFSDIQESPRYPAGLALR
FARVKRYRPDKTPDQADTIQTVSELFRAQRN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgcccgactggtcgaaacggtccaacgcgtccgcgccacgaccaagaaatct
gaaaagatccggttgctggcggaatgtcttggccaagtcaatggacgcgaggccgtcctg
gccgcgctgtatctcactggttccctccctcaaggcaagatcggcatcgggtggagcgtc
attcagaaggcgatgcacgacgcgcccgcctcaggcgagccgctcatgctttcggacgtg
gaccggttgatggatgtcttggcagccgagcgaggcgccggttcaatggatcggcgaatt
ctcgcgctaagcaacctattcagccgggccaacccgcaggaacgtacgttcctgtcgcaa
ttgctcatcggtgaggtgagacaaggtgccctggaagcggtgttgctggacgccatcgcc
gctgcggccggcctgcctgccgccgaggtgcggcaagcgtttatgttcgctccgaacatc
ggagacctcgcgcaggcggcgctggaagaacaatccgccggtctcgcgcgcttctcgatg
cgtctattcgttccggttgcaccgatgttggccaacagcgccgaggacgtggacgaagcg
ctgcagcggctggatcgtgcggttttcgagtacaagctggacggagcacgcgtccaagtg
cacaaaggcggcgatgacgtgcgcgtcttcacccgccaattgcaggacatcaccggccgg
ctcccggagatcgtcgaatgggccaggaacctgccggtgcgtgaagcggtcctcgatggc
gaagcgatcgcgttgagacctgacgggcgtccgcagccgtttcagacgacgatgcgacgc
ctcggccgcatcaaggacgtggccgcgatgcgggaatcgataccactctcgccttttgca
ttcgatgcattatacctggacggcagctcactcttgacccaatcgtacgaagaacgcctt
cgcgctttggccaccatgacaccagccgaattgatcccgcacgtcgtcacttcacaaccc
gaagaagcccggcgattcctcgctcagtcgttggcggcggggcatgaaggcgtcatggcc
aaatctccaactgccccttacgtggcgggtcaacgcggataccattggctgaagctgaag
gaagcgacttcgctcgacctcgtcatcctcgccgccgagtggggcaacggccgccgcgaa
ggctggctctcgaatctgcacctgggcgcgcgcgatccatcgagcgggcatttcgtgatg
cttggcaaaaccttcaagggtttgaccgacgagatgctgcggcagcagacggaacaactc
ctatcgctcgagacgcacagggaagagcacacggtcttcgtgaaacaccagatggtcgtg
gaaattgcgttcagcgacatccaagaatcgccgcgctacccggccggactcgcgctgcgc
ttcgccagagtcaaacgctaccgcccggacaagacgcccgaccaagcggacacgattcag
acggtgtcggaattgttccgcgcacagcggaattag
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