Nitrincola iocasae: F5I99_06930
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Entry
F5I99_06930 CDS
T06212
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nik
Nitrincola iocasae
Pathway
nik00521
Streptomycin biosynthesis
nik00523
Polyketide sugar unit biosynthesis
nik00525
Acarbose and validamycin biosynthesis
nik00541
O-Antigen nucleotide sugar biosynthesis
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01250
Biosynthesis of nucleotide sugars
Module
nik_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
F5I99_06930 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F5I99_06930 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
F5I99_06930 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F5I99_06930 (rfbB)
00525 Acarbose and validamycin biosynthesis
F5I99_06930 (rfbB)
Enzymes [BR:
nik01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
F5I99_06930 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QEW06251
UniProt:
A0A5J6LDC3
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Position
1514763..1515860
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AA seq
365 aa
AA seq
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MKRLMVTGGAGFIGANFVHYWMQAHPDDFVLVVDALTYAGNLANLEAVQQSPNFQFVQAD
ICDTPKMEQLLREHQLDTLVHLAAESHVDRSILGPDAFIETNIIGTHSLLKAARKVWLTE
GQCAEHRFHHVSTDEVYGTLEPSDPAFTEDTAYAPNSPYAASKAASDHLVRAYHHTYGLQ
VSTSNCSNNYGPYHFPEKLIPLIITNILANRPLPIYGDGRQIRDWLYVEDHARGIEKVLL
QGKVGENYNIGGHNEWHNIDIVQYICTEMDKAFAANASLKQQYPEALSAIAGQSATLITY
VKDRPGHDRRYAIDAHKSGRELGYLPRESFETGIRKTLHWYLENPQWWRAVMDGSYRQWI
ATQYD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttaatggtcactggcggagccggttttatcggtgctaactttgtacactac
tggatgcaggcacatcctgacgacttcgttctggtagtcgatgccctgacttatgcgggt
aaccttgccaacctggaagctgtgcagcaaagtcccaactttcagtttgtgcaggccgat
atctgcgatacgcctaaaatggagcagttactgcgtgagcatcaacttgatacgctggtg
catctggccgccgagtcacacgtggatcgttcgattctgggtccggatgcctttattgaa
accaatattatcggtacccatagcctgctgaaagcggcccgcaaggtttggttaaccgaa
ggccagtgtgcagagcatcgtttccatcatgtctccaccgatgaggtatacggcaccttg
gagccaagtgatccggcctttaccgaagacactgcctacgctcccaattcaccctatgcc
gccagcaaagccgcttctgaccacctggtgcgtgcctaccaccatacttatggcctgcag
gttagcaccagtaactgctccaacaattacgggccgtaccattttcctgaaaaactgatt
ccattgatcatcaccaatattctggcaaaccgtcctttgcctatctatggcgatggccgc
cagataagggattggttgtatgtggaagaccatgcccgcggtatcgagaaggtactgttg
cagggtaaggtgggcgaaaactataatatcggtggtcacaacgagtggcacaatatcgat
atcgtgcagtacatctgtaccgaaatggacaaggcgtttgccgccaatgcatccctaaaa
caacaataccccgaagcgctctcagcgattgctggccagagtgccaccctgattacctat
gtgaaagaccggcccgggcatgatcggcgttatgccatcgatgcccataaatccggacgt
gaactgggttatctgccccgtgaaagttttgaaacaggcattcgtaaaacactgcactgg
tacctggaaaacccacaatggtggcgtgcggttatggatggttcttaccgtcagtggata
gccactcaatacgactaa
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