KEGG   Nitrincola iocasae: F5I99_06930
Entry
F5I99_06930       CDS       T06212                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
nik  Nitrincola iocasae
Pathway
nik00521  Streptomycin biosynthesis
nik00523  Polyketide sugar unit biosynthesis
nik00525  Acarbose and validamycin biosynthesis
nik00541  O-Antigen nucleotide sugar biosynthesis
nik01100  Metabolic pathways
nik01110  Biosynthesis of secondary metabolites
nik01250  Biosynthesis of nucleotide sugars
Module
nik_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:nik00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    F5I99_06930 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    F5I99_06930 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    F5I99_06930 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    F5I99_06930 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    F5I99_06930 (rfbB)
Enzymes [BR:nik01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     F5I99_06930 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 adh_short KR
Other DBs
NCBI-ProteinID: QEW06251
UniProt: A0A5J6LDC3
LinkDB
Position
1514763..1515860
AA seq 365 aa
MKRLMVTGGAGFIGANFVHYWMQAHPDDFVLVVDALTYAGNLANLEAVQQSPNFQFVQAD
ICDTPKMEQLLREHQLDTLVHLAAESHVDRSILGPDAFIETNIIGTHSLLKAARKVWLTE
GQCAEHRFHHVSTDEVYGTLEPSDPAFTEDTAYAPNSPYAASKAASDHLVRAYHHTYGLQ
VSTSNCSNNYGPYHFPEKLIPLIITNILANRPLPIYGDGRQIRDWLYVEDHARGIEKVLL
QGKVGENYNIGGHNEWHNIDIVQYICTEMDKAFAANASLKQQYPEALSAIAGQSATLITY
VKDRPGHDRRYAIDAHKSGRELGYLPRESFETGIRKTLHWYLENPQWWRAVMDGSYRQWI
ATQYD
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaagcgtttaatggtcactggcggagccggttttatcggtgctaactttgtacactac
tggatgcaggcacatcctgacgacttcgttctggtagtcgatgccctgacttatgcgggt
aaccttgccaacctggaagctgtgcagcaaagtcccaactttcagtttgtgcaggccgat
atctgcgatacgcctaaaatggagcagttactgcgtgagcatcaacttgatacgctggtg
catctggccgccgagtcacacgtggatcgttcgattctgggtccggatgcctttattgaa
accaatattatcggtacccatagcctgctgaaagcggcccgcaaggtttggttaaccgaa
ggccagtgtgcagagcatcgtttccatcatgtctccaccgatgaggtatacggcaccttg
gagccaagtgatccggcctttaccgaagacactgcctacgctcccaattcaccctatgcc
gccagcaaagccgcttctgaccacctggtgcgtgcctaccaccatacttatggcctgcag
gttagcaccagtaactgctccaacaattacgggccgtaccattttcctgaaaaactgatt
ccattgatcatcaccaatattctggcaaaccgtcctttgcctatctatggcgatggccgc
cagataagggattggttgtatgtggaagaccatgcccgcggtatcgagaaggtactgttg
cagggtaaggtgggcgaaaactataatatcggtggtcacaacgagtggcacaatatcgat
atcgtgcagtacatctgtaccgaaatggacaaggcgtttgccgccaatgcatccctaaaa
caacaataccccgaagcgctctcagcgattgctggccagagtgccaccctgattacctat
gtgaaagaccggcccgggcatgatcggcgttatgccatcgatgcccataaatccggacgt
gaactgggttatctgccccgtgaaagttttgaaacaggcattcgtaaaacactgcactgg
tacctggaaaacccacaatggtggcgtgcggttatggatggttcttaccgtcagtggata
gccactcaatacgactaa

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