KEGG   Nitrincola iocasae: F5I99_13445
Entry
F5I99_13445       CDS       T06212                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
nik  Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:nik00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nik03400]
    F5I99_13445
DNA repair and recombination proteins [BR:nik03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     F5I99_13445
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_30 AAA_22 zf-ribbon_3 zinc_ribbon_2 SLFN-g3_helicase AAA_16 zf-tcix ERCC3_RAD25_C SNF2-rel_dom DZR P-loop_SecA
Other DBs
NCBI-ProteinID: QEW07414
UniProt: A0A5J6LFS3
LinkDB
Position
2928319..2930055
AA seq 578 aa
MQPIILRNYQRQAVEATLSHFRHSSESAVIVLPTGAGKSLIIAELARLARQRILVLTHVR
ELVEQNHAKYAALGLQAGIFSAGLKRRDHQHQVTFASIQSLAGHTQSFSGAFSLVIIDEC
HRVSNDEDSQYQQVLTHLRQHNPALKLLGLTATPYRLGEGWIYRRDYRGFVRDTLSATFE
HCIYELPLSQLIREGYLTPPVCIDAATRHYDFSQLSNECAGDYDTEEVNRLLHKYPRVTR
AICEEIVEQAVRRKGVMIFAASIEHAEEILSYLPRAQACLITGNTDTVDRDQMLQAFKQQ
QIKYLVNVSVLTTGFDAPHVDLIAILRPTRSVSLYQQIAGRGLRLFPGKSDCLIIDYAAN
GFNLFSPEVGSPKPAANTEPVQVFCPECGFANTFWGRTDDQGQVVEHFGRRCQGLVGESL
DNQCHFRFRFRECPQCNAENDITARRCEQCKSILIDHDDLLKRALSLKNARILRCAGMTF
TLQDERLRVTYHDEEGETLSEYFDLSQPAQQKVFNHIFRRRHDDKPRSKINSAQQALAFA
TQLKHPDFVIARQHKHYWSVSERVFDYVGKYRKAYELY
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgcaaccgattatactacgtaattaccagcggcaggcagtcgaagcaacgctgagtcac
tttagacacagctcagaatcggctgtaattgtattaccgaccggtgctggcaagagtttg
atcattgccgaactggcgcgtcttgctcgccaacgcatattggtgctgacccatgtcagg
gagttggtcgagcaaaaccatgctaaatatgccgcactaggactacaagccggtattttt
tcggctggattgaagcgtcgggaccatcagcaccaggttacttttgccagcattcaatcc
ttagccggacacacccagtcatttagtggagccttctcactggtaattattgatgaatgt
catcgtgtcagtaacgatgaagacagtcagtatcagcaagtgctgacgcatctgcgccag
cataaccccgctttaaaattactcggtctcaccgctaccccctatcggctgggtgaaggc
tggatctaccgccgggattatcgtggctttgtcagagacacactcagcgccacctttgag
cattgtatttatgagctgcccctcagccagcttattcgcgaaggttatttgaccccaccg
gtttgtattgatgcagccactcgccattatgatttttcccagctcagtaacgagtgtgca
ggtgattatgacaccgaagaggttaatcggctgctacacaaatatcctcgggtcacccgg
gctatctgcgaagagatcgtagaacaggccgtccgacgcaagggagtaatgatttttgct
gccagcattgagcatgctgaagaaattctgagctacctgccgcgggcacaggcttgtctg
atcaccggcaatacagacacagtcgaccgggatcagatgctgcaagccttcaaacaacag
cagatcaagtatctggttaacgtttcagttctgacgaccgggtttgatgcgcctcatgtg
gatttaattgccattttgcgcccgacccgctcggtcagcctgtatcagcaaattgccgga
cgagggctgcgactctttcccggtaaatccgactgcttaatcatagactatgccgctaat
ggttttaatctgtttagccccgaggtcggttctcccaaaccagcagccaataccgagccg
gtgcaggtattttgcccggaatgtggttttgccaataccttctggggacgcaccgatgac
caaggccaggttgtggaacactttggtcgccgttgccaaggcctggtgggtgaatccctg
gataatcagtgccattttcggttccgttttcgcgaatgcccgcaatgcaacgcagaaaac
gatatcactgcaagacgctgtgagcagtgcaagagtatactcattgatcatgacgacctg
ttgaaacgggcattatcgttgaagaatgcccgaattctccgctgtgccggtatgacattc
accctacaggatgaacgtttgcgagtgacctaccatgatgaagagggtgaaacactcagt
gaatattttgacttgagccaaccggctcagcagaaggtttttaatcatatattcaggcgt
agacatgacgacaaaccgcgcagcaaaatcaactcagcacaacaggcactggcctttgca
actcagttaaaacaccctgactttgtcatcgccagacaacacaagcactactggtctgtg
agtgaaagagtgtttgattatgtcggcaaataccgcaaggcttatgagttatactaa

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