Candidatus Nitrotoga sp. AM1P: W01_00020
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Entry
W01_00020 CDS
T06613
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
W01_00020 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nim01007
]
W01_00020 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nim03016
]
W01_00020 (valS)
Enzymes [BR:
nim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
W01_00020 (valS)
Amino acid related enzymes [BR:
nim01007
]
Aminoacyl-tRNA synthetase
Class I (U)
W01_00020 (valS)
Transfer RNA biogenesis [BR:
nim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
W01_00020 (valS)
Prokaryotic type
W01_00020 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
BBJ22075
UniProt:
A0A455X871
LinkDB
All DBs
Position
complement(304..3483)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSYPSKQLNELGNLPVLTDVVDADSLGIPTLTEIVAEEPSALLAENQEENKEFTTLSDAQ
YQHLATQIAPQLEILLRAKLAPQFDALWQEAWHQAKSSLPELIQAHISTPPVPSPSAIIT
PLLTVPDRIKLNTINMELTKSFEPQAIEARWYPIWESAGYFQAKLESDKPAYAIMLPPPN
VTGTLHMGHAFQDTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQLDVQKIKRHD
LGREKFIERVWKWKEESGSTITHQMRRLGASCDWSRERFTMDEGLSEAVTEVFVKLYEQG
LIYRGKRLVNWDPVLGTAVSDLEVVAQEEDGFMWHIAYPLETGVGALIIATTRPETLLGD
VAVAVHPEDTRYQHLIGKRLKLPLCNRTIPIIADEYVDPAFGTGCVKITPAHDFNDYIVG
QRHSLTPINIFTLDAKINEHAPGVYQGLDRFDARKKVLSDLSAQNLLVDTKPHKLMVPRG
DRSHAVIEPMLTDQWFVKMEGLAQRGLQAVADGEIKFVPENWTNTYNQWLTNIQDWCISR
QLWWGHRIPAWHDEQGNIFVARNEEDARKQAGNSKLRQDEDVLDTWFSSALWPFSTLGWP
HDTKELKTFLPTSVLVTGFDIIFFWVARMVMMTLHFTDKVPFREVYVHGLIRDAEGQKMS
KSKGNVLDPLDLIDGISLEDLVAKRTQNLMNPRQAESIEKQTRKHFPDGIPAFGTDAMRF
TFASLASHGRDIKFDLQRCEGYRNFCNKLWNATRFVLMNCEGQDIGLDESLPLKFSAADK
WLIGRLQQAETEMADHFDHYRFDMAARTLHELVWDTYCDWYLELAKVQLSPHSGSPLSVE
EGALNTARHRATRRTLVRVLETILRLAHPIIPFITEELWQKVAPLAGKQGDSIMLQPYPQ
ANSKLIDPIALQQINLLQEMVTACRKLRSEMNLSPAQRVPLIMSGDATILHDFAPYLQAL
GKLSGVSLVDDLPNTDAPVAIVGNFKLMLEIEIDVDAECERLDKEIARLAGEITKAQSKL
GNASFVLRAPPQVVDQERRRMDDFTITLIQLQAQLDKLG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagctatccgtccaaacagttaaatgaattaggtaaccttcctgtacttaccgatgta
gtcgatgccgactccctgggaattcccacactgacagaaatcgtggctgaagaaccttca
gcgctcctagcggaaaatcaagaagaaaataaagaatttactaccttatctgacgcccaa
taccagcatctcgcgacgcaaatcgcaccgcaactggaaatactactgcgcgcaaaactt
gcaccacaattcgatgcgctatggcaagaggcttggcaccaagctaaatcaagtctgccc
gaattaattcaagcgcacatttccacaccgcccgtaccctctccatccgctataattacg
ccccttctcactgtacccgacagaattaaattaaatactatcaacatggaactcacaaaa
agctttgaaccgcaagcaatcgaagcgcgctggtatcctatatgggaaagcgcgggttat
ttccaggctaaattagagagcgacaagcctgcttacgccatcatgctgccgccacctaat
gtgaccggcactttgcacatgggacacgccttccaggacacgcttatggacgcgctcacc
cgttatcaccgcatgcgcggagataacaccctgtggcagccgggtactgaccatgccgga
attgccacacaaatcgtggtagagcgccagctggatgtccaaaaaattaaacgccacgac
cttggccgtgaaaaattcattgagcgcgtgtggaaatggaaggaggagtccggctctacc
atcactcaccagatgcgtcgcctcggcgcctcatgtgattggtcacgggagcgcttcacc
atggacgaaggtttgtccgaagccgtcactgaagtattcgtcaaactctacgagcaaggt
ttaatctatcgcggtaagcgattggtgaattgggatccggtactgggcaccgcagtatcc
gatctggaagtagtcgcgcaggaagaagacggcttcatgtggcacatcgcttatccgctg
gaaaccggtgtgggtgctttaatcatcgccaccacacgccctgaaacgctgctcggcgac
gtagctgtggcggtacatcctgaagatacacgctaccaacacctgatcggcaagcgcttg
aaactgccactgtgcaatcgcactattcccatcattgccgatgaatatgtcgatccggct
tttggtactggctgcgtaaaaattacgcccgcgcacgatttcaacgactacatagtgggg
cagcgtcacagccttacgccgatcaacatatttacgctggatgcaaaaatcaacgaacat
gcacctggcgtctatcaagggctggatcgtttcgacgcacgcaagaaagtcctttccgac
ctttccgcacaaaacctgcttgtagacaccaagccgcacaagctgatggtgccgcgcgga
gaccgcagtcatgcagtaattgaaccgatgctcaccgatcagtggttcgtgaaaatggaa
ggtttggcgcagcgcggcctgcaagcggtggcagatggtgaaattaaattcgtgccggaa
aactggaccaacacatacaaccagtggttaaccaacattcaagactggtgcatctcgcgc
caattatggtggggacatcgcatcccggcgtggcatgacgaacaaggcaatatatttgtc
gctcgcaacgaagaagatgctcgcaagcaggcaggaaactcaaagttgcgccaggacgag
gacgtgctcgacacctggttctcctccgcattgtggccgttctcaacactgggctggcca
cacgacaccaaagaactcaaaacgtttctgccgacctcggtactggttaccggcttcgac
atcatctttttctgggtggcgcgcatggtgatgatgacgctgcacttcaccgacaaagtg
ccattccgcgaagtgtatgtacatggcctgatccgcgacgcggagggacaaaagatgagc
aagtccaaggggaatgtgctagacccgctggatctcattgatggcatctcgctggaagat
ttggtggccaagcgcacgcagaatctgatgaatcccaggcaggcagaaagtatcgaaaaa
cagacacgcaaacatttcccggacggcatcccggccttcggcacagatgccatgcgcttc
accttcgccagccttgcctcgcatgggcgcgacatcaaattcgatctgcaacgctgtgag
ggttaccgcaatttttgtaacaagctatggaatgccacgcgctttgtacttatgaattgc
gaaggtcaggatatcggactggatgaatcattgccgcttaaattcagtgcagcagacaaa
tggttgatcggtcgtttgcaacaggctgaaactgaaatggcggatcactttgaccattac
cgtttcgacatggcggcgcgcacgctgcatgaattggtgtgggacacctactgtgattgg
tatctggaattagccaaggtacaactcagccctcactccggcagccccctttcagtggaa
gaaggagctttgaataccgcacgacatcgtgccacgcggcgcaccttggtgcgtgtactg
gaaaccatactgcgtctggcgcaccctatcatcccgttcatcactgaagagctgtggcag
aaagttgcgccgctggccggaaaacaaggtgacagcatcatgctgcagccctatccgcaa
gccaactccaagttaattgaccccattgccttgcaacaaatcaacctgctgcaggaaatg
gtcaccgcctgtcgtaagctgcgcagcgaaatgaacttgtctccagcacaaagagtgcca
ctgattatgagcggcgatgcaaccatcctgcacgacttcgcaccttacctgcaagcgctg
ggcaagttaagcggggttagtctggtggatgatctgcctaacaccgatgcgccagtcgcc
atcgtcggaaatttcaagttgatgctggaaattgaaattgacgtggacgcagagtgtgag
cgcctagacaaggagatagcccgtcttgcgggcgaaatcaccaaggcgcaaagcaagctg
ggtaatgccagtttcgtcttacgcgcaccaccacaagtggtggatcaagaacgcaggcgt
atggacgatttcaccattacgctgatccagttacaggcgcagctcgacaagctgggttaa
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