Candidatus Nitrotoga sp. AM1P: W01_22040
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Entry
W01_22040 CDS
T06613
Symbol
rfbC-1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00521
Streptomycin biosynthesis
nim00523
Polyketide sugar unit biosynthesis
nim00541
O-Antigen nucleotide sugar biosynthesis
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01250
Biosynthesis of nucleotide sugars
Module
nim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
W01_22040 (rfbC-1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
W01_22040 (rfbC-1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
W01_22040 (rfbC-1)
Enzymes [BR:
nim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
W01_22040 (rfbC-1)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBJ24277
UniProt:
A0A455X585
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Position
complement(2470941..2471489)
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AA seq
182 aa
AA seq
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MHVIQTAIADLLIIEPKVFGDARGVFFESFNQKVFENITGRSVNFVQDNHSRSAQHVLRG
LHYQIKQPQGKLVRVVAGEVFDVAVDIRKSSPTFGLWAGVMLSAENKRMFWVPEGFAHGF
VVLSEHAEFLYKTTDYWAPEYERSILWNDPDLAIDWHLDQNTPILSKKDQEGSFFVKAES
FP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttatccaaacagcaatagccgaccttttaattatagaacccaaagtgttcggt
gatgcccgcggggtttttttcgagagcttcaatcaaaaagttttcgagaatatcacaggg
cgatccgtcaacttcgtccaggataaccactcccgatcggcccagcatgtactacgtgga
ttgcattatcaaatcaaacaaccacagggtaaattagttcgtgtagtggcaggagaagta
ttcgatgtggcagtggatattcgcaaatcatcacccacctttggtttatgggcgggcgtt
atgctttctgccgaaaacaaacggatgttttgggtgccggaagggtttgcccatggcttc
gtcgtgcttagcgagcatgcggagttcctctataaaacaacagattattgggcgcctgaa
tatgagcgctctatcttatggaacgatcccgacttggctattgattggcatcttgaccag
aacacacctattttgtccaaaaaagatcaagagggttcgttttttgtcaaggcagaatca
ttcccataa
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