Candidatus Nitrospira inopinata: NITINOP_3110
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Entry
NITINOP_3110 CDS
T04169
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00521
Streptomycin biosynthesis
nio00523
Polyketide sugar unit biosynthesis
nio00541
O-Antigen nucleotide sugar biosynthesis
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01250
Biosynthesis of nucleotide sugars
Module
nio_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NITINOP_3110 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NITINOP_3110 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NITINOP_3110 (rmlC)
Enzymes [BR:
nio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NITINOP_3110 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
CUQ68082
UniProt:
A0A0S4L240
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All DBs
Position
1:complement(3016799..3017344)
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AA seq
181 aa
AA seq
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MRATPLAIPDVVLLEPRVFGDNRGFFFESFNQARFEAAIGKPIAFVQDNHSRSVKGVLRG
LHYQIRQPQGKLVRIVVGAVFDVAVDLRRSSPTFGQWVGEILSAENKRQLWIPEGFAHGF
VVLSEVAECLYKTTDYYAPEHERCLIWNDPTVGITWPLEGVPILSSKDRQGVTFDRAERF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccacgccgcttgccatccccgacgtcgtcttgcttgaaccccgggtcttcgga
gataaccgggggtttttcttcgaaagtttcaaccaagcccggttcgaggcggcgatcggc
aaacccatcgcctttgtccaagacaaccactcccgatcggttaagggggtcttgcggggg
ttgcattatcagattcggcaaccgcaggggaagttggtgcgcatcgtggtgggagccgtc
ttcgacgtggcggttgatctacgccgctcgtcgccgacatttggacagtgggtcggtgag
atcctgtcagccgagaacaaacggcaactctggattccagagggctttgcccatggcttt
gtcgtcctgtcggaggtcgccgaatgtttgtacaagacgaccgactattacgcgccggag
cacgagcggtgtctcatctggaacgatccgacggtcgggatcacatggccgctggaggga
gtgccaattttgtcctcaaaggaccgtcagggtgtcacgttcgatcgggcggaacggttc
gaatga
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