Nitrosopumilus sp. K4: NsoK4_00635
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Entry
NsoK4_00635 CDS
T07707
Name
(GenBank) 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
nip
Nitrosopumilus sp. K4
Brite
KEGG Orthology (KO) [BR:
nip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nip03016
]
NsoK4_00635
Enzymes [BR:
nip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
NsoK4_00635
Transfer RNA biogenesis [BR:
nip03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
NsoK4_00635
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
IMP_cyclohyd
AAT
Motif
Other DBs
NCBI-ProteinID:
QUC64827
UniProt:
A0A8B2HQC0
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All DBs
Position
complement(120238..121266)
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AA seq
342 aa
AA seq
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MSCSGEIVGNDDQLIQIRPAISEQLKKAKYGVADHSTVELCHWTKKSFKHEGSCYKHKFY
GISTHRCMEFSPAGMHCENRCVYCWRPMEFYDSLKMEPEHVSEPEEILKKLMQERKKLIM
GYYGDSRNDKERLDESLLPSHYAISLSGEPTMYPKLPEMIKYLKSLKETKSIFLVTNGQE
PDMIERLKKEDALPTQLYLSTNASDYESFQRINKPKYDDSWQRWNKTLEMLKDLDTRTVL
RITLIRDYNDQKEMIPSFVSMFEKASPHFIEIKSYMHIGRSTNRLEYSNMLEMDEVREFA
RGITKNSNMFSIMDESFVSRIVVLQNKQRNIERFISAYADTN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttctggtgagatagtaggaaatgacgatcagttgattcagatcaggccagct
atttcagagcaactaaaaaaagcaaaatacggagttgcagatcactctacagtagaatta
tgtcattggacaaagaaatccttcaagcatgaaggaagttgttacaaacacaagttctat
ggaatatctactcacagatgcatggagttttcccctgcaggaatgcattgtgaaaataga
tgtgtgtattgttggagaccaatggagttttatgattcattaaaaatggaacctgagcat
gtatctgagccagaagaaattttgaaaaaactaatgcaagaaagaaagaaactgatcatg
ggatactatggagattccagaaatgataaagaaagactagacgagtcattgttgccaagt
cactacgcaatttctctttcaggagaaccaactatgtatccaaagcttccagagatgata
aaatatctaaaatcattgaaggaaactaaatcaatttttcttgtaacaaatggtcaagaa
ccagacatgattgagagattaaaaaaggaagatgcgctgccgactcagctttatctttca
actaatgcatcagactatgaatcatttcagagaattaacaaaccaaagtatgatgattca
tggcaaagatggaacaaaactcttgaaatgttaaaggatttagatactagaacagttctt
cgaataactttgatcagagactataatgatcaaaaagaaatgataccatcttttgtttca
atgtttgaaaaagcaagccctcactttattgaaattaaatcatatatgcatattggtcgc
tctacaaatagattagagtattcaaatatgctcgagatggatgaggtcagagagtttgca
aggggtattacaaaaaatagtaacatgttttctataatggatgaaagttttgtttcacga
atcgtagtattacaaaacaaacagagaaacatcgagagatttatttctgcatacgcagat
accaattag
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