KEGG   Candidatus Nitrosotenuis sp. DW1: DSQ19_10330
Entry
DSQ19_10330       CDS       T07741                                 
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
niu  Candidatus Nitrosotenuis sp. DW1
Pathway
niu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:niu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DSQ19_10330 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:niu03021]
    DSQ19_10330 (tfb)
Transcription machinery [BR:niu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     DSQ19_10330 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     DSQ19_10330 (tfb)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_C Sigma70_r4 HTH_11 Cyclin_N HEF_HK HTH_Tnp_ISL3 HTH_AsnC-type Sigma70_r4_2 Auto_anti-p27 zf-CCHC_5 OrfB_Zn_ribbon
Other DBs
NCBI-ProteinID: QLH09804
UniProt: A0A7D5M847
LinkDB
Position
1803108..1804019
AA seq 303 aa
MTQTSRSSDRCPRCSKGSMLTDGSTGEMFCNTCGFVATERVEEEGPEWRSFSKEEGENRT
RTGTPTSLAMHDMGLATIIGQADKDASGKPLTSSMKSTIERLRTWDSRSQVHEPVDRNFR
QAFSELDRLKDKLALSDAVIEKTAYIYRKALDKGLVRGRSIPGLVAAALYAACRNTETPR
TLTDVANGINIKRKDVARCYRLLLRELELKMPVVDPIKGVARIASIADLSEKTKRKALEF
LKEASRIEVSAGKDPMGLAAAALYLACVMLGENKTQKDIAQAAGVTEVTIRNRYKGLKEA
LKL
NT seq 912 nt   +upstreamnt  +downstreamnt
atgacacaaacttcacgaagtagcgatagatgtccacgttgctctaaaggatcaatgtta
acagatgggagtacaggagagatgttttgtaatacctgcggttttgtcgcaaccgaaaga
gttgaggaagaaggaccagaatggcgttcattttcaaaagaagagggagagaaccgaact
agaacgggaaccccaacttcgcttgcgatgcacgatatgggccttgcaaccataatcggt
caggcagacaaggacgcatctggaaagccacttacatcctcaatgaaaagcaccattgag
agacttagaacttgggatagccgaagtcaagtacacgaaccagtagacaggaactttaga
caggcattcagtgagttagacaggctaaaggacaagttagcattatctgatgccgtaatc
gaaaagactgcctatatctacagaaaggcacttgacaaaggccttgttagaggtcgctca
attccaggactagttgctgcagcgctatatgcagcgtgcagaaatacagagactccaaga
acgcttacagatgtagcaaatggaatcaacataaagcgaaaggatgtagcaagatgttac
agattgcttctcagggagctagaactgaaaatgccagtagtagacccaattaagggagtt
gcaaggattgcaagtattgcagacctaagcgagaagacaaaaagaaaggcgcttgaattc
ctaaaggaagctagccgtattgaggtatctgctggaaaggatccgatgggccttgcagca
gcagcactttacttggcttgtgtgatgttaggagagaacaagactcagaaagacatcgcc
caagctgcaggtgttacagaagtaacaatccgaaatcgatacaagggtcttaaagaagca
ctaaaactctaa

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