Niveibacterium microcysteis: JY500_06520
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Entry
JY500_06520 CDS
T07082
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
niv
Niveibacterium microcysteis
Pathway
niv01501
beta-Lactam resistance
niv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JY500_06520
01503 Cationic antimicrobial peptide (CAMP) resistance
JY500_06520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
niv02000
]
JY500_06520
01504 Antimicrobial resistance genes [BR:
niv01504
]
JY500_06520
Transporters [BR:
niv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JY500_06520
Antimicrobial resistance genes [BR:
niv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JY500_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Luciferase_cat
Motif
Other DBs
NCBI-ProteinID:
QSI79140
LinkDB
All DBs
Position
1404167..1407307
Genome browser
AA seq
1046 aa
AA seq
DB search
MSHLCIRRPILASVLSIVVTIAGLAAMFALPIAQYPDISPVQVTISTAYPGADAKTIEDS
VAAPLEAQINGVDNMMYMQSTSSAAGQYSLTVYFKVGTDPDIAQVQVQNRISLAMTQLPD
IVQKAGVSVAKRSNSFLMLLGLYSPDGRFDDKTIANYANVYVLDAIKRVPGANQASIMGV
PDLAMRIWLKPDRMAALGITPTDIQRAVSAQNQQFGIGRVGASPTDRPVELTFPVVAGGR
FSDPSEFERIILRTDAKGAAIVRLGDVGRAEVGQKDYLVRATMNGKPTTLIAVYQQAGSN
ALQVAKDVRAMMAEMKKTFPEGMDYLVSLDTTTFVQDSINEVVHTLFEAVVLVVLVVYLF
LQNLRATVIPTVAVVVSLVGTFIGMTLLGFSINMLTLFGLVLAIGIVVDDAIVVIENVER
NMHEFKLSPRDAAFKAMDEVTGPVIAIVLVLSAVFIPVAFISGTTGLLYKQFAITIVISV
ALSGFVALTLTPAMAALMLKPQHGEPNRFFRWFNRVFDRMTTSYAAGVQLTIKRVAVAML
VFAVMVAAILGLFKHIPGSFVPMEDQGYVLAATILPDAASLDRTQKTTERVAQDFAKLPS
VRNTSSIPGFSMIDNQMKSSAGIVFVEMKPFEERGGGLRASAKAAVFQARKASATIQDGV
VVPLMPPPIPGLGSSGGFEFWIQSKGGANYAEVDRVTKAFVAEAKKRPELADMTTLVNAA
SRQLKVEVDRNRAETLGVPVQDVYAAMQTLFGSLYVSQYNAFSRVFQVILQAEPKYRESP
DDLQNIYVRQSGGKMLPLSAVTTTHFTTGAELISRFNGFSAAKVTGNAAAGYSSGQAIQA
MEEVAAETLPEGFSFAWSGLAYEEKQAGGTTAVVFAFGIIMVFLILAAQYESWGLPFSVI
TAVPFGIFGALVAIFLRGLENDIYFQVGLVTLVGLAAKNAILIVEFAVLKRQEGLPIVEA
AVEAARLRLRPIVMTSMAFIAGAVPLAIATGAGANSRHSIGTGLIGGMIGATTLALFFVP
LFFVMVQTLGEKLGGKKAATGEAHHE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atctcccacctctgtatccggcggccgattctcgcctcggtgctctcgatcgtcgtgacg
atcgcgggcctcgcggcgatgttcgcattgccgatcgcgcagtaccccgacatctcgccg
gttcaggtcacgatatccaccgcctacccgggcgccgatgccaagacgatcgaggattcc
gtggccgcgccgctggaagcgcagatcaatggcgtcgacaacatgatgtacatgcagtcg
accagctcggccgcaggtcagtattcactgacggtgtacttcaaggtcggcaccgatcca
gacatcgcgcaggtgcaggtgcagaaccgcatcagcctcgcgatgacccaactgccggac
atcgtgcagaaggcgggtgtcagtgtcgcgaagcgctccaacagcttcctgatgctgctg
ggcctgtattcgcccgacgggcgcttcgacgacaagacgattgcgaactacgcgaacgtg
tatgtgctcgacgcgatcaagcgtgttccgggcgccaaccaggcctccatcatgggcgtg
ccggacctggcgatgcgcatctggctcaagccggaccgcatggcggcgctgggcatcacg
ccgaccgacatccagcgcgccgtgtcggcccagaaccagcagttcggtatcggccgcgtc
ggtgcttcaccgacggatcggccggtcgagctgaccttcccggttgtcgcgggtgggcgt
ttctcggatccgtctgaattcgaacggatcattttgcgcaccgacgccaaaggtgccgcg
atcgtgcggctcggggacgtcgggcgggccgaggtcgggcaaaaggactacctcgtccgc
gcaacgatgaacggcaaaccgacgacgctgattgccgtgtatcagcaagccggctcgaac
gcgctacaggtcgcaaaggatgtgcgcgcgatgatggcggagatgaagaagaccttcccg
gaggggatggactatctcgtctcgctcgataccaccaccttcgtgcaggattcgatcaac
gaagtggtgcatacgctctttgaggcagtggtgctggtcgtgctggtggtttacctgttc
ctgcagaacctccgtgcgacggtgatcccgaccgtcgcggtggtggtgtcactggtgggt
accttcatcggcatgacgctgctggggttctcgatcaacatgctgacgctgttcggcctg
gtgctcgcgatcggtatcgtggtggacgatgcgatcgtggtgatcgagaacgtcgagcgc
aacatgcacgagttcaagctttcgccgcgtgacgcggcgttcaaggcgatggacgaagtg
accgggccggtgatcgcgatcgtgctggtgctctccgccgtattcattccggtcgccttc
atcagcggcacgacgggcctcctgtacaagcagttcgccatcaccatcgtgatctcggtg
gcgctctccggcttcgtggccctgacgctcacgccagcgatggcggccctgatgctgaag
ccccaacacggcgagccgaaccgcttcttccgctggttcaaccgtgtgttcgaccggatg
acgacgagctatgcggcaggggtgcagttgaccatcaagcgcgtcgccgtggcgatgctg
gtgtttgccgtgatggtcgcggccatccttggcctcttcaagcacatccctggctccttc
gtgccgatggaagaccagggctatgtactggccgccacgatcctgccggacgcggcgagt
ctggatcgcacgcagaagacgaccgagcgggttgcgcaggacttcgccaaattgccctcg
gtgcgcaacacgtcttccatccccggtttcagcatgatcgacaaccagatgaagtcgagc
gccggcatcgtgttcgtcgagatgaagcccttcgaggagcgtggcggcggcctgcgggcg
tcggccaaagcggcggtgttccaggcgcgtaaggcgagtgccacgattcaggatggggtg
gtggtgccgttgatgccgccgccgattccggggctgggcagttcaggcggcttcgagttc
tggattcagagcaagggcggcgcgaactacgccgaagtcgaccgggtgaccaaggcgttt
gtggcagaggcgaagaagcggcccgagctggccgacatgaccacgctggtgaacgcggca
tcgcgccagttgaaggtggaggtcgaccgcaaccgtgcggagacgctcggtgtgccggtg
caggatgtgtacgccgcgatgcagacgctgtttggctcgctgtacgtgagtcagtacaac
gccttctcgcgcgtcttccaggtgatcttgcaagccgaaccgaagtaccgcgaatcgcct
gacgacctgcagaacatctatgttcgccagtccggcgggaagatgctgcccttgtccgcg
gtcaccacgacgcacttcaccaccggcgccgagctgatcagccgcttcaacggtttctcg
gcggccaaggtcaccggcaacgcggctgccggctacagctcggggcaggcgattcaggcg
atggaggaagtggcggcggagacgctgcccgagggcttctcgttcgcatggtctggcctc
gcttacgaggagaaacaggcgggcggtaccactgccgtcgtgttcgccttcggcatcatc
atggtgttcctgatcctggcggcgcagtacgagtcctggggcctgccgttctcggtgatt
accgcggtgcccttcggcatcttcggtgcgctggtagccatcttcctgcgtggtctggag
aacgacatctacttccaggtcggtctcgttacgttggtcggcctggccgcgaagaacgca
atcctgatcgtcgagttcgcggtgctgaaacgtcaggaagggctgccgatcgtcgaggct
gcggttgaagcggcgcgattgcggctgagaccgatcgtgatgacgtcgatggccttcatc
gcaggcgccgtaccgttggcgatcgcgaccggggcgggcgcgaactcgcggcactcgatt
ggtaccgggctgatcggcggcatgatcggcgcgaccacgctggcgctgttcttcgtaccc
ctgttcttcgtgatggtgcagacgttaggcgagaagctgggcgggaagaaggccgctacc
ggggaggcgcatcatgagtaa
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