Nitratireductor mangrovi: FQ775_23470
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Entry
FQ775_23470 CDS
T06518
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
niy
Nitratireductor mangrovi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QDZ03086
UniProt:
A0A5B8L4X0
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Position
complement(3026786..3029239)
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AA seq
817 aa
AA seq
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MATQKLGDYQRKRDFSRTGEPEGQETAASGNRFVMHKHSASADHYDLRLELDGVLKSWAV
PKGPSLNPDDKRLAVETEDHPLEYIDFEGVIPEGEYGGGPMIVWDTGVWAPMDDAEKSLA
AGAFKFRLAGAKLNGGWMLTRLKPKPGEGAKKNWLLFKERDRAADRELDIIEARPESVKS
GRRIEDLVAPERLPAKPPKLVPGRLSGAVRSAMPERVSPQLATPAERPPSDKDWLHEIKF
DGYRTIALVDEGKARLMTRKGLDWTKRYGDVGQAFAGLPCKEAVIDGEIVALDDRGVSRF
SLLQQALSDGAGNRLVFYAFDLIHLDGWDLRKVSLVKRKDLLSRLLAGQVSARSPIQFSD
HVAGDGAALFDQASELGLEGIISKDARAPYREERTRSWLKVKALQSGDFVIAGYTVSEAA
EGLAALALGEWENGELQYRGKVGSGFDAAALADLLNRLEPLSDGAANLDGAPKDVIAVRP
VLTAHIHYANRTADNMLRHAVYKGLREAELSGTKAEPRERLITDADLASIWVTNPTRRLF
GKSGPTKLDIAVYYALVGDFMLPHILGRPVSLVRCPTGKPQDCFFQRHAFSGMPSSVATF
QSTNSDGETKSYLSVEGVKGYLALAQFGVVEFHIWGTTAKRLEKADRMVFDLDPGEGVEW
REMVEAAVHIKGELEAMGLAPFVKTSGGKGLHITVPVKAKLSWKQLHQRSGGIAAAIAAT
APDTFTTNMAKDKRRNRIFVDFHRNARGATAVAPYSLRARTNLPASTPLSWSDLESIDAP
EDLNYSSLPGLLTSSGDPWADISDFAREMPPPSNAGA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacagaagctcggcgactatcagcgcaagcgcgatttttccagaaccggcgag
ccggaaggccaggagaccgctgcctccggcaaccgcttcgtcatgcacaagcattcggcc
agcgcggaccattatgatcttcgtcttgaacttgatggcgtgctgaaaagctgggcggtg
ccgaaagggccatcgctcaaccctgatgacaagcgactggcggtcgagaccgaagaccac
ccgctcgaatatatcgatttcgagggggtcatccccgagggcgagtatggcggcggtccg
atgatcgtctgggacaccggcgtctgggcgccgatggatgatgcggagaaaagcctcgcc
gccggcgccttcaagttccgtcttgccggggcaaagctcaatggcggctggatgctgacc
cggctgaagcccaagccgggcgagggggccaagaagaactggctgcttttcaaggagcgc
gaccgggccgccgaccgcgagttggacattatcgaggcacggccggagagcgtcaaaagc
ggacgccgcatcgaagacctggtggcgccggaacgattgccggcgaagccgcccaagctc
gtgccggggcggctgtcgggtgccgtccgatccgccatgccggaacgagtctctccgcag
ttggcgacgcccgccgagcggccaccgtcggacaaggactggctgcacgagatcaagttc
gacggctaccgtacgatcgccctcgtcgacgagggcaaggcccggctcatgacccgcaag
gggctcgactggaccaaacgctacggcgacgtcgggcaggcctttgccggcctgccctgc
aaggaggctgtcatcgacggcgagatcgtggcgctcgacgacaggggcgtcagccgcttt
tccctgctgcagcaggcgctttccgacggcgccggcaacaggctcgtcttctatgccttc
gacctgatccacctcgacggctgggacctgcgcaaggtatcgctcgtcaagcgcaaggat
ttgctgtcacgcctgctcgccgggcaggtttcggctcgatcgccgatccagttcagcgac
catgtcgccggcgacggcgcggccctcttcgatcaggcatctgagctcgggctggaaggc
atcatctccaaggatgcgcgggcaccctaccgggaagagcgcacccgctcctggctgaag
gtgaaggcgctgcagtcgggtgatttcgtgattgccggctacaccgtgtcggaagccgcc
gagggccttgcggcactggcactcggcgaatgggaaaatggcgaactgcaatatcgtggc
aaggtcggctccggcttcgatgcggccgcgctcgccgatctcctgaacaggctggaaccg
ctgagcgacggcgccgcgaaccttgacggagctccgaaggatgtaatcgcggtgcggccg
gtgctgaccgcgcatatccactacgccaaccgcaccgccgacaacatgctgcgccacgcc
gtctacaaggggttgcgcgaggccgagctttccgggacgaaagccgagccgcgcgagagg
ctgatcaccgacgccgaccttgcctcgatctgggtcaccaacccgacccggcgccttttt
ggcaagtcgggcccgaccaagctcgatatcgcggtctattacgcacttgtcggcgacttc
atgctgccgcatatcctcggccggccggtgtcgctggtgcgctgcccgaccggcaagccg
caagactgcttttttcagcgccacgccttctccggcatgccgagttcagtggcgacattc
cagtcgaccaattcggacggtgagaccaagtcctacctgtccgtcgaaggagtgaagggt
tatctggcgttggcgcagttcggcgtagtcgagttccatatctggggcacgacggccaag
cgactggagaaggccgaccgcatggtcttcgacctggatccaggcgagggcgtggaatgg
cgcgagatggtcgaagccgcggtccacatcaagggcgaactggaggcgatggggcttgcg
cccttcgtcaagacgtcgggcggcaagggcctgcacatcacggtgccggtgaaggcgaag
ctcagctggaagcagctgcatcagcgctccggtggcatcgcggctgcgatcgcggcgact
gcccctgacaccttcacgaccaatatggcgaaggacaagcgccgcaatcgcatcttcgtc
gactttcaccgcaacgcgcgcggcgcgacggccgtggcgccctactcgcttcgggcgaga
accaacctgccggcctccacaccgctctcttggagcgatctggaatccatcgacgcccca
gaggatttgaactattcttcgcttccggggttgttaaccagttcaggcgatccttgggcc
gatatctcggatttcgcccgggaaatgccgcccccgtcgaatgctggggcgtag
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