Nitrospira japonica: NSJP_0589
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Entry
NSJP_0589 CDS
T05001
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nja
Nitrospira japonica
Pathway
nja00521
Streptomycin biosynthesis
nja00523
Polyketide sugar unit biosynthesis
nja00541
O-Antigen nucleotide sugar biosynthesis
nja01100
Metabolic pathways
nja01110
Biosynthesis of secondary metabolites
nja01250
Biosynthesis of nucleotide sugars
Module
nja_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NSJP_0589 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NSJP_0589 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NSJP_0589 (rmlC)
Enzymes [BR:
nja01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NSJP_0589 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
SLM46761
UniProt:
A0A1W1I1A2
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Position
I:complement(567517..568098)
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AA seq
193 aa
AA seq
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MRVTTIDIPGVLLLEPTVLRDHRGFFAETYQVQRYRDAGLAESFVQDNLSRSVRGTLRGL
HFQEPHAQGKLIMALEGSVYDVVVDIRVGSPTFGRWYGLELSDGNLRQIYVPPGCAHGFC
VTSETAIFLYKCTDYYSPRHERGVLWNDPALAISWPISDPILSAKDRQYPPLAAMKDELP
SYRAASNAGLKSR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaaccaccatcgatattcccggcgtgctgctgctcgagccgacggtccttcgc
gaccaccgggggttctttgccgaaacctatcaggtccagcgttatcgggacgccggactc
gccgagtcattcgttcaggacaatctctcccgttcggtacgggggacgttgcggggcctg
catttccaggaaccccacgcgcagggcaagctgatcatggcgctggagggaagcgtctac
gacgtggtggtcgacatccgcgtcgggtcccccaccttcggacgctggtacggcctcgaa
ttgtccgatgggaacctgcggcagatctatgtgccacccgggtgcgcgcacggcttctgc
gtgacgagcgagaccgccatcttcttgtacaaatgcacggactactattcgccacggcat
gaacgcggggtgctctggaacgatccggcgctggcgatctcctggccgatcagcgatccg
attttatccgccaaggaccggcaataccccccattggcggccatgaaggacgaattaccg
tcgtatcgcgcggcttcaaatgcgggcctgaaaagccgttga
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