Nitrospira japonica: NSJP_1531
Help
Entry
NSJP_1531 CDS
T05001
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nja
Nitrospira japonica
Pathway
nja00300
Lysine biosynthesis
nja00470
D-Amino acid metabolism
nja01100
Metabolic pathways
nja01110
Biosynthesis of secondary metabolites
nja01120
Microbial metabolism in diverse environments
nja01230
Biosynthesis of amino acids
Module
nja_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSJP_1531 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSJP_1531 (lysA)
Enzymes [BR:
nja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NSJP_1531 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF5421
Motif
Other DBs
NCBI-ProteinID:
SLM47703
UniProt:
A0A1W1I4F9
LinkDB
All DBs
Position
I:1458866..1460128
Genome browser
AA seq
420 aa
AA seq
DB search
MHSFEYRHGELYCEQVPVSRIAKEVGTPCYVYSHATLTRHFRAYDGAFKDIPHVVAFAMK
ANSNLAILRLMAKEGSGVDIVSGGELFRALKAGVPPSKIVFAGVGKSADEIRDALKAGIL
MFNVESSAELRAIDGVAASVGKKARVALRINPDIDPKTHPYISTGLKKSKFGIAADRALE
EYKLASSLDHIEIVGVHAHIGSQLTEVTPFVEALKKVVALVESLKAQGIGIQYLNVGGGL
GITYSDEKPPLPKDLAEAIFPLVKDRNLTLVMEPGRVIVGNAGILVTRALYQKDGEAKRF
VIVDAAMNDLIRPSLYSAYHDIRPVSESLLARPKHSVDVVGPVCESGDFLAKDRTLPEVK
PGDLLAVMSAGAYGFVMASNYNSRPRVPEVLVKDADIHVIRARETYEDLVKGETIPSFLS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcttcgaatatcgccacggtgaactctattgcgagcaagtgccggtcagccgg
atcgccaaagaggtcggcaccccctgctatgtctacagccacgcgacgttgacccgtcat
ttccgagcctacgacggggccttcaaggacattccgcacgttgtcgccttcgcgatgaag
gcgaattccaatctggcgatcttgcgtctgatggccaaggaaggcagcggagtcgatatc
gtctccggcggagaactgtttcgcgcgctaaaggccggggtgcccccgtcgaaaatcgta
tttgcgggagtcgggaagagcgcggacgagattcgcgatgccttgaaggccggcatcctg
atgttcaacgtcgagtcgtccgccgaactccgggcaatcgacggagtggcggcctccgtc
gggaaaaaggcgcgggtggctttgcggatcaatcccgatatcgatcccaagacccatccg
tatatctccacgggactcaagaaaagcaagttcggcatcgccgcggacagggcgttggag
gaatacaaactggcgtcctcgctggaccatatcgaaatcgtgggcgtccatgcccatatc
ggatcgcaattgacagaggtgacgccgtttgtcgaggccttgaagaaagtcgtggcccta
gtcgaatctttgaaggctcagggcatcggaattcaatacctgaacgtcggaggcggtctc
ggcattacctactcggacgagaagccgccgctgcccaaggacttggccgaggccattttc
cccttggtcaaggaccggaatctgacgctcgtgatggagcccggccgggtgatcgtgggc
aatgccggcattctcgtgacgcgcgcgctgtatcagaaggacggagaggccaagcgcttc
gtgatcgtcgatgcggcgatgaacgacttgatcagacccagtctctacagcgcgtaccac
gatatccgtcccgtctcggaatcgttgctggccaggcccaaacattctgtcgacgtcgtc
ggacccgtctgcgagtccggagatttcctcgccaaggatcgcaccctgcccgaggtgaag
ccgggcgatctcctggccgtcatgagcgcgggcgcctatgggttcgtgatggcgtccaat
tacaattcccgaccgcgggtgccggaggtcctggtgaaggacgccgacattcatgtgatc
cgcgcgcgggaaacctacgaggatttggtgaaaggcgagacgatcccctcgtttttgagc
taa
DBGET
integrated database retrieval system