Nitrospira japonica: NSJP_1758
Help
Entry
NSJP_1758 CDS
T05001
Name
(GenBank) Phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nja
Nitrospira japonica
Pathway
nja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NSJP_1758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1758
Enzymes [BR:
nja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NSJP_1758
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NSJP_1758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SLM47930
UniProt:
A0A1W1I4K5
LinkDB
All DBs
Position
I:complement(1678408..1679052)
Genome browser
AA seq
214 aa
AA seq
DB search
MKLHPFQSAASFIPPRLTPPALRRAAACCTGCDLYRTATQTVFGEGPRHPSIVFVGEQPG
DQEDRMGRPFVGPAGALLNRALAEAGIARDKVYVTNAVKHFKWEPQGKKRKHKRPSAAEV
AACRPWLQAEVSVLKPHALVCLGVTAAQSVFAKTVRLSELRGRPWDTALATHVFVTIHPS
AILRYPDAAARSEAFGRLVEDLRRIGRFVRNQAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgcatcctttccaatccgccgcttcgttcattcccccaagactgactcctccc
gctctccggcgtgcggcggcctgctgcaccggctgcgatctctatcggaccgccacgcaa
acagtcttcggagagggaccacgccatccctcaatcgtgttcgtcggcgaacaaccgggc
gatcaagaagaccggatgggacggcccttcgtcggaccggctggagccctgttgaatcgg
gccctggccgaagcgggcattgcacgcgacaaggtgtacgtcaccaatgccgtcaaacat
ttcaaatgggaaccgcaaggcaagaagcgcaaacacaagcggccgtcggccgccgaagtg
gctgcatgccggccctggctgcaggcagaggtctcggtgttgaagccgcatgcactcgtt
tgcctcggtgtcacggccgcgcaatcggtattcgccaagacggtccgactgagcgagtta
agaggtcggccgtgggataccgcactggcaacccacgtatttgtgacgatccacccctcg
gcgattctccgatatccggacgcagccgcgcgcagtgaagcatttggtcgcttggtcgag
gatcttcgacgcatcggacgattcgtacgcaaccaggcagcctag
DBGET
integrated database retrieval system
