Niastella koreensis: Niako_3448
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Entry
Niako_3448 CDS
T01679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nko
Niastella koreensis
Pathway
nko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Niako_3448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nko03021
]
Niako_3448
Transcription machinery [BR:
nko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Niako_3448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_24
HTH_Tnp_ISL3
TnsD
HTH_40
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEV99752
UniProt:
G8TKS3
LinkDB
All DBs
Position
4322489..4323064
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AA seq
191 aa
AA seq
DB search
MQHYPTHTDTELLRMLSQHDELAFAEIYNRYWKLLYSSAHNILQVKDAAQDAVQEVFISL
WRRRADIQVDALQPYLHQAVRFQVFKAIRAEKTDQQFFNRLALITQDILFEDPMLFKELD
TLYQQLVQDLPPDEQEIFRLHRDSGLTYKQIAEQKNISIKTVEKKMSRSLRELRFGLDDA
LVVLITIHLLS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacattatcctacgcatactgacactgagttactgagaatgctttctcaacacgat
gagcttgcctttgccgaaatctacaaccggtactggaagctattgtattcatctgcccac
aatattttacaggtaaaagacgccgcacaggatgctgtgcaggaagtgtttatctcctta
tggcggcgccgcgccgatatccaggtagatgcgttacaaccttatttgcaccaggcggtg
cgcttccaggtattcaaagctatccgggccgaaaaaaccgaccagcaattctttaaccgg
ctggccctgataacccaggatattttgtttgaagatcccatgttgtttaaagaactggac
accttataccagcaactggtgcaggacctgccgcccgatgaacaggagatctttcgcctg
caccgcgacagcgggctcacctataaacagatagccgaacaaaagaatatctccataaaa
acagtagaaaagaaaatgagccgctcattgcgggaattgcgctttgggttggatgatgcg
ctggtggtattaataaccatccatttacttagttag
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