Candidatus Nitrosopumilus koreensis: NKOR_04855
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Entry
NKOR_04855 CDS
T02304
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nkr03000
]
NKOR_04855
Transcription factors [BR:
nkr03000
]
Prokaryotic type
Helix-turn-helix
Other families
NKOR_04855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
MarR_2
HTH_20
HTH_IclR
HTH_5
HTH_24
HTH_9
RTP
DUF2250
HTH_36
HTH_27
Rrf2
Neuralized
Motif
Other DBs
NCBI-ProteinID:
AFS80857
UniProt:
K0B6X1
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All DBs
Position
805004..805954
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AA seq
316 aa
AA seq
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MTMEEALLEGYVFDARHAESIDKINKIFSQYGLTPNQSKVYLHLTKAGEKTASEICKSLK
IPRTETYHLLNSLEQKGIIYSIFGKPSKFNSIPINDAMNILIDNEKKRISELESKKKTII
SLWQTLPEFHSEKAELSENRFQSLQGRNSILVKIEQMTKTATKSIHVLGTEANFIKFYHT
DFVDYLKNTKAELGIVTTFSEKGNYVFEGINLEHIKKLEDSHQDNFSFIIKDESEVLFFV
NNLDVEFMAMWTDSKSFVSTLESLFKLIWRKSGHVLEKEDEEFDEKEYEHRLREIEQEKI
ILNYIHKNILAKKRRT
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggaagaggcattattagaaggatatgtgtttgatgcaagacatgcagaatca
atagacaagatcaataaaattttctctcaatatggattaacgccaaatcaatctaaagta
tatcttcatttaacaaaggcaggagaaaaaacagcctcagaaatatgtaaaagtttgaaa
attcccagaacagaaacatatcatctgttaaattcattagagcaaaaaggaataatctat
tcaatttttgggaaaccctcaaaattcaattccattccaataaacgatgcaatgaatatt
ctgatagataatgaaaagaaaagaatttcagaattagaatcaaaaaagaaaacaatcata
tcattatggcaaacacttccagaatttcatagtgaaaaagcagaattgtctgagaacaga
ttccaaagtctacaaggacgaaattcaattttagtaaaaatagaacagatgacaaaaaca
gcaacaaagtcaatacatgttttgggaacagaagctaattttataaaattttaccataca
gattttgtagattacctaaaaaacaccaaagcagaattaggaatagttacaacattttct
gaaaaaggaaattatgtttttgagggaattaatttagaacatataaaaaaattagaggat
agtcatcaagacaatttctcatttatcataaaagatgaatcagaagtattgttttttgta
aataacttagatgttgaatttatggcaatgtggacggattcaaaatcttttgtatcaaca
ttagaatccctgttcaaattgatttggagaaaatcaggacatgttttagaaaaagaagat
gaggaatttgatgaaaaggaatacgaacacagactaagagagatagaacaagaaaaaatc
attctaaactatatccacaaaaacattcttgcaaaaaagaggagaacataa
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