Nitrosospira lacus: EBAPG3_001365
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Entry
EBAPG3_001365 CDS
T04907
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00521
Streptomycin biosynthesis
nlc00523
Polyketide sugar unit biosynthesis
nlc00541
O-Antigen nucleotide sugar biosynthesis
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
nlc01250
Biosynthesis of nucleotide sugars
Module
nlc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EBAPG3_001365 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EBAPG3_001365 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EBAPG3_001365 (rfbC)
Enzymes [BR:
nlc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EBAPG3_001365 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ARO86541
UniProt:
A0A1W6SL69
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All DBs
Position
complement(320192..320743)
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AA seq
183 aa
AA seq
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MRAVSTSIPDVLIIEPKVFGDSRGFFFESFNLKVFSQATGLDVNFVQDNHSRSVKGVLRG
LHYQIRQPQGKLVRVVRGAVFDVSVDIRKSSPNFGQWVGVELTEDNYRQVWVPPGFAHGF
YVLSDSADFLYKTTDYYVPDFERSLAWNDPKVAIAWPIDNDEQPIISIKDELGASLADAE
LFA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagtttccacctccatccctgacgtcctgattattgaaccgaaagtcttcggg
gatagccggggatttttctttgagagcttcaatctaaaggttttcagtcaagctaccggg
cttgatgtaaattttgtccaagacaatcacagtcgttcggtcaaaggcgtgctgcggggt
ctgcactaccagatccggcaaccacagggcaagctggtgcgcgtagtgcgtggtgcggta
tttgatgtctcggtagatatccgcaagtcttctccgaactttggccagtgggtcggagtg
gaactgactgaagataactaccgtcaggtatgggtgccgccggggtttgcacatggtttt
tacgtgctcagtgatagcgccgattttctgtacaaaaccacagactactatgttcctgat
tttgagcgcagtcttgcgtggaacgatcccaaggttgccatcgcctggccaattgataat
gacgaacaaccgatcatttcaatcaaggacgagctgggagcgagtctcgcagatgccgag
ctatttgcatga
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