Nitrosospira lacus: EBAPG3_005595
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Entry
EBAPG3_005595 CDS
T04907
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nlc
Nitrosospira lacus
Pathway
nlc01501
beta-Lactam resistance
nlc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EBAPG3_005595
01503 Cationic antimicrobial peptide (CAMP) resistance
EBAPG3_005595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlc02000
]
EBAPG3_005595
01504 Antimicrobial resistance genes [BR:
nlc01504
]
EBAPG3_005595
Transporters [BR:
nlc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EBAPG3_005595
Antimicrobial resistance genes [BR:
nlc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EBAPG3_005595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ARO87284
UniProt:
A0A1W6SNA5
LinkDB
All DBs
Position
complement(1269385..1272561)
Genome browser
AA seq
1058 aa
AA seq
DB search
MNSHFFIDRPIFSSVLSIVIVVVGLVALKTLPIAQFPQITPPMVQIDADYPGASAEVVAE
AVARPIEVQLPGIDNLLYYDSTSTNDGHMTMRLTFEIGTDVDIAQVQTQNRQRLAEPQLP
DEVVRQGVTVKKTSPDLLAVIALSSTDPRHDTVFLSNYALLRILDNVKRLPGVGDATIFG
GQNYSMRLILDPVRMAQLDLTPTEIAAVVREQNRDFPAGRVGREPTSQGTELTIPVITRG
RMSEVKEFEDMIVRAYPDGSMVRMRDIARVELGAQSYDLEGRWNGKPNTFLLTFLAPGAN
ALDTVRRVRAEMDKLAKSFPAGVSYDIPYDTTTFIDVSIKEVLKTLAEATLLVILVVFVF
LQSWRATLIPAIAVPISLIGTLAGMAALGFSINTLTLFGMVLAIGIVVDDAIVVVENVER
HMTQGGLSPRDAAKKAMDEVTGPVIAIVLVLAAVFVPVAFLGGITGELYKQFAITIALSV
AISGFVALTLSPALCALVLKPGHGQPRGIWKMFNRSFGWIQTRYVGAVGIILKRSMMALV
IFGALIAIILGLFKTIPGSFLPEEDQGYFITIVQLPDGASKTRTIEVLSRIESYFKSIPA
IHSTDTLAGQNFVFGTRGTNQATMFVPLHHWDTRKNADEQVPGLIAAAFQEFAKIPEALI
LAFNAPSIRGLGSTGGFSLQLQDPSGGDFSEFAAVAQEFVAKAVEHPAIAAASTNFRVSA
PRLYAQVDRERAKALGVPISEVFDTMQAYFGNLYINDFVKFGRIYRVQTEALPEYRSSPE
DISKVYVRAQNNEGRTMIPLDSVVTTEFTSGPDPVTHFNGFNTALVLGGAAPGYSSGQAL
EALEQVANEILIPRGYAIEWSGISFQEHKAGGQSIVVFAFALLMVFLVLAALYESWSIPL
AVILAIPFGVLGALLAIWTRGLTNDIYFQIGLVTLIGLAAKNAILIVEFANQRYATGVPL
ADAALEAAHLRFRPIVMTSLAFILGVFPLVVASGAGAASRNSIGTGVFGGMLTATFLAIF
FVPLFFVMIGKIARRGKHSAAETRQSATDAPFSEKESS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcatttttttattgatcgtcccattttctcatcggtcctgtccatcgttatt
gtggtggtcggtctggtcgcgttaaagacgctgcccatcgcgcagtttccgcaaattaca
ccccccatggtgcagattgacgccgattatccgggcgccagcgcggaagtcgtggcagag
gctgtggcgcgcccgatcgaggtacagctccccggcatcgataatcttctgtactacgac
tccacaagtacgaatgatgggcatatgacgatgaggctcacattcgaaatcggaacagac
gtggatatcgcccaggttcagacacagaatcggcagcgccttgccgaaccgcagttgcct
gacgaggtcgtccgccagggcgtaactgttaaaaagacgtctccggatctgctggcggtc
atcgcgctgagctccaccgatccccgccatgacaccgtttttctctcgaactatgccctg
cttcgaattctcgataacgtcaagcggctgccgggtgtcggagacgccactatttttggc
ggtcagaactattccatgcggttgattcttgatcccgtccggatggctcagctcgacctc
acgccaaccgagatcgcggctgtggttcgagagcagaatcgggatttcccagctggaaga
gttgggcgcgagcccacctcccagggcaccgaactcactatcccggtcattacgcggggc
cgaatgagcgaggtgaaggaattcgaggacatgatagtgcgggcctatccggatggctcc
atggtacggatgcgggacatcgcgcgagtggaactgggcgcccaatcgtacgatcttgaa
ggtcgatggaatggaaaacccaacacgtttcttttgacctttcttgcgccgggagccaat
gcgcttgataccgtccggcgggtccgtgcggaaatggataagctcgccaagagttttccg
gcaggcgtgtcctacgatattccctatgacaccaccaccttcattgatgtctccatcaag
gaagtcctgaagacgctcgctgaagcgacacttctggtcatcctggtcgtttttgttttt
ttgcagagctggcgtgcgacgctcattccagccatcgccgttccgatttcgcttattgga
acccttgctggcatggcagcactgggtttttcgattaataccttgaccttgttcggcatg
gtcctggccatcggcatcgtggtggatgatgcgatcgtggtggtggagaacgttgagcgg
cacatgacccagggcggcctgtcgcccagggacgcggctaaaaaagccatggatgaagtg
accgggccagtcattgcaatcgtcctggtgctggctgccgtgtttgtgccggttgccttt
ctgggaggaattaccggtgagctgtacaaacaatttgcaattaccattgccctgtcagtg
gccatttcagggttcgtggcactcacgctgagccctgccctgtgcgcccttgttctcaag
ccaggtcacggccagcccaggggaatatggaaaatgttcaaccgctcgtttggctggata
cagacccgctacgttggagctgtcggaatcatcctgaaacgatcgatgatggctctggtt
atcttcggagcgctgatagcgatcatccttggcctgttcaaaactatcccgggcagtttc
cttccggaagaggatcagggctactttattaccatcgttcaactaccggatggagcttcc
aagacacggacgatagaggtactgagtagaatcgaaagttactttaagtcgattccggcc
attcactcgacagacactctggccggccagaattttgttttcgggacgcgcggaacaaat
caggcgacaatgttcgtcccgctgcatcattgggatacacgcaagaatgccgacgaacaa
gttcccggtcttattgccgcggcttttcaggaatttgccaaaatccccgaggccctgatc
ctggcctttaatgccccttccatcaggggcctgggttccacgggaggtttttccctccaa
ttgcaagaccccagcgggggtgatttttccgagttcgccgccgtcgctcaggaatttgtg
gccaaggctgtggaacaccctgcaattgcggctgccagcacaaattttcgtgtgagcgca
ccccggctctatgcgcaggtggaccgggaacgggccaaagcgctgggcgtgcccatttcc
gaggtgttcgataccatgcaggcttattttgggaatctgtatatcaatgatttcgtaaaa
ttcggccgcatctatcgcgtgcaaacggaggcgctccctgaataccggtccagcccggag
gatatcagcaaggtctatgtgcgcgcccagaacaacgagggtcgcaccatgattccgctg
gactcggtcgtcaccaccgagttcaccagcggtccggacccggtcacgcatttcaatgga
ttcaacaccgcgctcgtgctgggaggcgccgcacccggatacagctcgggacaagcgctt
gaagcattggaacaggtagccaacgaaatcctgattcccaggggttacgcgatcgaatgg
agcggaatctcgttccaggagcataaagccgggggacaatccatcgtggtatttgccttc
gccctgctcatggtctttctcgtcctggccgctctgtacgaaagctggtcgattccactg
gcagtcattctcgcaataccttttggagtcttgggcgcattgctggccatatggacgcgg
gggctgaccaatgacatttatttccagatcggattagtaacactgatcgggctggctgca
aaaaacgcgatcctgatcgtcgagtttgccaatcagcgatacgcgacgggtgtgccgctg
gctgacgccgcgctcgaagcagcgcatcttcgttttcggcctattgttatgacttcccta
gcctttattctaggggtattcccccttgtggtggcttcgggggctggtgcggccagccgg
aattccattggaacaggcgtgtttggtggcatgctgaccgccacatttctggccatattc
tttgtgccgcttttttttgtaatgattggaaaaatagcgcgacgaggtaagcattcggcg
gctgaaactcggcaaagtgcgactgacgcccccttctcggaaaaagaatcatcttaa
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