Nomascus leucogenys (northern white-cheeked gibbon): 100593111
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Entry
100593111 CDS
T03265
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03008
Ribosome biogenesis in eukaryotes
nle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100593111 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
100593111 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100593111 (XRN2)
03019 Messenger RNA biogenesis [BR:
nle03019
]
100593111 (XRN2)
03009 Ribosome biogenesis [BR:
nle03009
]
100593111 (XRN2)
03016 Transfer RNA biogenesis [BR:
nle03016
]
100593111 (XRN2)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100593111 (XRN2)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
100593111 (XRN2)
Ribosome biogenesis [BR:
nle03009
]
Eukaryotic type
Pre-60S particles
RNases
100593111 (XRN2)
Transfer RNA biogenesis [BR:
nle03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
100593111 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
100593111
NCBI-ProteinID:
XP_003268293
Ensembl:
ENSNLEG00000009991
UniProt:
G1RG93
LinkDB
All DBs
Position
13:complement(43719413..43809541)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
RFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcatagtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcagtattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcagcgttcaaggaggttcagg
gcatcaaaagaaggaatggaagcagcagtcgagaagcagcgagtcagggaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgaattcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattacattagaaggcaaagagcccagcctaac
catgacccaaatactcatcattgtttatgtggagcagatgctgatctcattatgcttggc
cttgccacacatgaacccaactttaccattattagagaagaattcaaaccaaacaagccc
aaaccatgtggtctttgtaatcagtttggacatgaggtcaaagattgtgaaggtttgcca
agagaaaagaagggaaagcacgatgaacttgccgatagtcttccttgtgcagaaggagag
tttatcttccttcggcttaatgttcttcgtgagtatttggaaagagaactcacgatggcc
agcctaccgttcacatttgatgttgagaggagcattgatgactgggttttcatgtgcttc
tttgtgggaaatgacttcctccctcatttgccgtcgttagagattagggaaaatgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctagtggaatattaactcct
catgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcaatatctcctaatacgagtttc
acatctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggctggaagcagcggtac
tacaagaacaaatttgatgtggatgcagctgatgagaaattccgtcggaaagttgtgcag
tcatacgttgaaggactttgctgggttcttagatattattaccagggctgtgcttcctgg
aagtggtattatccatttcattatgcaccatttgcttcagactttgaaggcattgcagac
atgccatctgattttgagaagggtacaaaaccgtttaaaccactagaacaacttatggga
gtttttccagctgcaagtggtaattttctacctccatcatggcggaagctcatgagtgac
cctgattctagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctcttgccattcgtggatgagcgaaggctacgagct
gccctagaagaggtatacccagacctcactccagaagagaccagaagaaacagccttgga
ggtgatgtcttatttgtggggaaacatcacccacttcatgacttcattttagagctgtac
cagacaggttccacagagccagtggatgtaccccctgaactatgtcatgggattcaagga
aggttttctttggatgaagaagccattcttccagatcaaatagtgtgttctcctgttcct
atgttaagggatctgacacagaacactgtagtcagtattaattttaaagacccacagttt
gctgaagattacatttttaaagctgtaatgcttccaggagcaagaaagccagcagcagta
ctgaaacctagtgactgggaaaaatccagcaatggacggcagtggaagcctcagcttggc
tttaaccgtgaccggaggcctgtgcacctggatcaggcagccttcaggactttgggccat
gttatgccaagaggctcaggaactggcatttacagcaatgctgcaccaccacctgcgact
taccagggaaacttatataggccgcttttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaaagg
tttgacagaggcgttggggctgaacctctgctcccatggaaccggatgctgcaaacccag
aatgcagccttccagccaaaccagtaccagatgctagctgggcctggtgggtatccaccc
agacgagatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcaggaagatacaattggaattaa
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