Nomascus leucogenys (northern white-cheeked gibbon): 100602884
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Entry
100602884 CDS
T03265
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X3
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100602884 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100602884 (PCF11)
03019 Messenger RNA biogenesis [BR:
nle03019
]
100602884 (PCF11)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100602884 (PCF11)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100602884 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
100602884
NCBI-ProteinID:
XP_003254685
Ensembl:
ENSNLEG00000016535
LinkDB
All DBs
Position
15:complement(53443124..53471627)
Genome browser
AA seq
1555 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIAPMAVKAPHQVPVQSEKSRPGTSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKPNSSKQEKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKEKDEHTKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPSSTPKAGKIRQSGAKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQEDFLVVVHQIRQLFQYQEGVREEQRSPFNDCFPLKRPRYED
SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI
DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ
AGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH
GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI
EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG
QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG
NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF
GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP
DNHLSQVDVNELFSKLLKTGILKLSQPDSATAQVSEVAAQPPPEEEEDQNEDQDVPDLTN
FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT
HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV
ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE
NPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTENDTVESV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactaggaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacgtctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacagaagaatcttacacaa
gaacaactaataaggcaacagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatccaaattacatgtttcacag
attgcccctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaacatccttacaaattcaggatttgaaaggaactaaccgggatcctcgtctgaac
aggataagccaacattctcatggaaaagatcaaagtcacaggaaagaatttctaatgaac
acattaaaccagtctgatactaagacaagtaaaactataccctctgaaaaaccaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaatta
gattctaaatcgaaatcgaaatcgaaatcaccatcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatcggaaagtatgaggttgtctgatatgaacaagaga
gatccaagattaaaaaaacatcttcaggataagacagatggcaaagatgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggaaaaagatgagcacacgaagtcatctgaacac
agactggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
acagaagagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaacgaaggcaaagaagtatgtctccatcatcgacacctaaagctggaaag
attcgccaatctggagctaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcgaccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacaacaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcactaaaggaattttatcacctcgagccccaaagcagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggaa
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtgtgcga
gaagagcagagatctccattcaatgattgttttccacttaagcgacctcgatacgaagat
tcagataaaccatttgtagatagcccagcatcaagatttgccggcctggatacaaatcag
cgacttacagctttagctgaagacagaccgttatttgatggacctagtaggccatcagta
gcaagagatggcccaacgaagatgatttttgaaggacctaataaattaagccctcgaatt
gatggacctcccacaccagcttctcttcggtttgatgggtcaccaggacaaatgggggga
gggggcccgttgagatttgaggggccacaaggtcagctaggaggtgggtgtcctttgaga
tttgaaggtcctccaggaccagtggggacacctctgcggtttgagggcccaattggtcaa
gcaggaggaggtggttttcggtttgaaggttcccctggtctgaggtttgagggatctgca
ggtggtttgcgatttgagggaccaggaggccagcctgtgggtggtttgaggtttgaggga
catcgtggtcaacctgtgggtggtctaaggtttgagggacctcatggtcagcctgtgggt
ggacttagatttgataatccccgaggtcagcctgtaggtggacttagatttgaggggggt
catggtccatcaggggctgcgattaggtttgatggacctcatggtcagccaggaggtgga
atcagatttgagggccctttgctacagcaaggggttggaatgaggtttgagggcccccat
ggtcagtcagtagctggtctgagatttgagggacaacataatcaacttggtgggaacctt
aggtttgagggtccacatggtcaaccaggggttggtatcaggtttgaaggccctttagtc
caacaaggaggtggaatgaggtttgagggtccttctgtaccaggaggtggactgagaatt
gaagggcctctgggtcaaggtggtccaagatttgaaggttgtcatgctttaaggtttgat
gggcagccaggtcagccgtcactcttgccaagatttgatggattacatggtcagccaggt
cctagatttgaaaggactcctggtcagccaggcccccagaggtttgatggaccacctgga
cagcaggttcaacccagatttgacggtgtacctcaaagatttgatggtccacaacatcag
caagcatcaaggtttgatattcctcttggtcttcaaggcacaagatttgacaatcatcct
tcacaaaggcttgaatcagtatctttcaatcagactggtccatataatgatccacctggc
aatgcttttaatgccccatcccaaggactacagttccaaagacatgaacaaatatttgat
tcacctcaaggaccaaattttaatggaccacacggccctggaaaccagagtttctctaat
ccacttaacagagcttctggacactattttgatgaaaaaaatcttcagagttctcagttt
ggaaattttggcaatatacctgctccaatgacagtaggaaatattcaggcatctcaacag
gttctgagtggtgttgctcagccagtagcttttggtcaaggacaacagtttttaccagtt
catccacaaaatcctggatttgttcagaatccttcaggagccctccctaaggcatatcct
gataatcatctcagtcaggtggatgtaaatgaattgttttcaaaattgctaaaaacagga
attctcaaattgtcccaacccgattcagctacagcacaagtaagtgaagtagctgctcag
cctccccctgaagaggaggaagatcaaaatgaagatcaagatgttccagatcttactaat
tttacagttgaagaattgaaacaacgttatgacagtgttatcaatcgactgtacactggt
attcagtgttactcttgtggaatgaggtttacaacatcacagacagatgtttatgcggat
catttggactggcattatcggcaaaatagaactgaaaaggatgttagcagaaaagtcact
catagacgttggtactacagtttaacagactggatagaatttgaggagatagctgatctg
gaagaacgggcaaagagccagttttttgaaaaggtgcatgaagaagttgtgctcaaaact
caagaggctgctaaagaaaaagagttccaaagtgtacctgctggaccagctggagcagtt
gagagttgtgaaatctgtcaagaacaatttgaacaatactgggatgaagaagaggaggaa
tggcatttgaaaaatgctattagagtagatggaaagatttatcatccatcatgttatgaa
gattatcaaaatacatcttcatttgattgtacaccatctcccagcaagacaccagttgaa
aaccctttgaatattatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagt
cccaaagttaaggaagaacgaattgatacaccaccagcttgtacagaggaaagcatagca
acaccctctgaaattaaaacagaaaatgacacagtcgagtcagtttaa
DBGET
integrated database retrieval system
