Nomascus leucogenys (northern white-cheeked gibbon): 100607540
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Entry
100607540 CDS
T03265
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nle03016
]
100607540
Enzymes [BR:
nle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
100607540
Transfer RNA biogenesis [BR:
nle03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100607540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Motif
Other DBs
NCBI-GeneID:
100607540
NCBI-ProteinID:
XP_030651536
Ensembl:
ENSNLEG00000013210
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All DBs
Position
17:complement(45884588..46160191)
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AA seq
732 aa
AA seq
DB search
MDPSVDTWDLSSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQDRNLQEKSVPKASQD
LMTNGYVSLQEKDIFVSGVKIFYGSQTGTAKGFATVLAEAVTSLDLPVAIINLKEYDPDD
HLIEEVTSKNLCVFLVATYTDGRPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG
NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWTTKFISQL
QALQKGERKKSCGGHCKKGKCDSHQHGSEEREEGSHEQDELYHRDTEEEEPFESSSEEEF
GDEDHQSLNSIVDVEDLGKIMDHVKKEKRETEQQEEKSGLFRNMGRNEDGERRAMITPAL
REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKC
VFCWRHHTNPVGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHC
ALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS
LKKIDRPLFKDFWQRFLDSLKALAVKQQRTVYRLTLVKAWNVDELQAYAQLVSLGNPDFI
EVKGVTYCGESSASSLTMAHVPWHEEVVQFVRELVDLIPNYEIACEHEHSNCLLIAHRKF
KIGGEWWTWIDYNRFQELIQEYEDSGGSKTFSAKDYMARTPHWALFGANERGFDPKDTRH
QRKNKSKAISGC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctgtggatacatgggacctctcctcacctttaatatcattatggataaac
aggttttacatttatttgggctttgctgttagcattagcctttggatttgtgttcagatt
gtcatcaagacgcaggacaggaacttacaggaaaaatctgttccaaaggcatctcaggat
ttgatgacaaatggttatgtctcccttcaagagaaagacatctttgtgtctggagtgaag
attttttatggttctcagactggcacagcaaagggatttgcaacagttcttgctgaagca
gttacatccctggatctgcctgtggcaattattaatctaaaagaatatgatccagatgat
catctgatagaagaggtgactagtaaaaatctctgtgtcttcctggttgcgacatatact
gatggccgaccaaccgaaagtgcagagtggttctgcaaatggttagaggaagcatccatt
gattttcgatttggcaaaacttacctgaagggtatgagatatgcggtatttggcctggga
aattctgcctatgccagccacttcaacaaggttggcaaaaatgttgacaagtggctctgg
atgcttggcgcacatcgtgtgatgagtcgaggggagggcgactgcgacgtggttaaaagc
aagcacggcagcattgaggccgacttcagagcatggacgaccaagttcatctcccagctg
caggcacttcagaaaggggagagaaagaagtcctgtggcggccactgcaagaaaggcaaa
tgtgattctcaccaacatggctcagaggagagggaggaaggatctcacgagcaggatgaa
ttgtatcacagagacactgaggaggaagaaccctttgagagctccagtgaagaagagttt
ggtgatgaggaccatcagagcctaaattccattgttgatgttgaagatttgggcaaaatt
atggatcatgtgaagaaagaaaagagagaaacggaacagcaggaagagaagtctggtttg
ttcaggaacatggggaggaatgaagatggtgaaagaagagcaatgataactcctgctctc
cgagaagcccttactaaacaaggttatcaattgattgggagccactcgggggtgaagctt
tgcaggtggacaaagtcgatgctccgagggagaggaggttgttacaaacacacattctat
ggaattgagagccatcgctgcatggaaaccaccccgagcttggcgtgtgctaataaatgt
gtcttctgttggcggcaccacaccaaccctgtgggcactgaatggcggtggaagatggac
cagcctgaaatgatcttgaaggaagccatcgaaaaccatcagaacatgattaagcagttt
aaaggagtaccgggcgtcaaagcggagcgctttgaagaaggaatgacggtaaaacactgt
gcattgtccctcgtgggagaaccaataatgtacccagagatcaacaggtttttgaagcta
ctccaccagtgtaaaatctccagcttcctggtcacaaatgcacaatttcctgcggaaatc
aggaacctcgagccagttactcagctgtatgtcagtgtggatgccagtaccaaagacagc
ctgaagaaaatcgaccgcccactcttcaaggatttctggcagagattccttgacagttta
aaagccttggcagtcaagcaacaacgaactgtctacagactgacgctcgtgaaagcatgg
aacgtggacgagctccaggcctacgcgcagctcgtgtccctggggaatcctgacttcatc
gaagtgaagggtgttacctactgcggagaaagttcagcaagcagtcttaccatggcccac
gtgccctggcatgaggaagtggtacagtttgtccgcgagttggtggatctgatccccaac
tatgaaattgcatgtgaacacgaacactctaattgcctcctgatagcacacagaaagttt
aaaattggtggtgaatggtggacgtggatcgattataaccgcttccaggaactcatccag
gaatatgaagatagtggtggatcaaaaacgttcagcgcaaaggattatatggccagaact
cctcactgggcattatttggtgccaatgaaagaggctttgatcccaaggacacaagacat
cagagaaagaacaaatcaaaggctatttctggatgttga
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