Candidatus Nitronauta litoralis: G3M70_08640
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Entry
G3M70_08640 CDS
T07016
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nli
Candidatus Nitronauta litoralis
Pathway
nli03410
Base excision repair
nli03430
Mismatch repair
nli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3M70_08640 (recJ)
03430 Mismatch repair
G3M70_08640 (recJ)
03440 Homologous recombination
G3M70_08640 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nli03400
]
G3M70_08640 (recJ)
DNA repair and recombination proteins [BR:
nli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G3M70_08640 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G3M70_08640 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G3M70_08640 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QPJ61936
UniProt:
A0A7T0G0K4
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All DBs
Position
1869400..1871160
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AA seq
586 aa
AA seq
DB search
MPDSKITEPDSLSRLNKRWCQNPVDAKAAASLEEALRVSRTLAHLLAGRGLAEIEVARFF
LDASLDNLHDPFLMTGMQQAAERVCQAVNAGEQITVFGDYDVDGVTSAALMVHFFRELGA
PIDYYLPDRKQEGYGVNNAALKEIKDRGSGLVITADCGITAVKETEYANGLGLDVIITDH
HQVGDEGLPPAIAVLNPHQPDCTYPFKFLSGVGIVFKLAAAIRRALHEKGWEKDRLPNLK
QHLDLFTLGTIADLAPLTGENHVLTVHGLEAVRTTQKPGLVALKSVSGCSGRIDAFSIGF
GLGPRLNAAGRMGKADTGFHLLVADDLNAAMEQAKGLDDINTKRKETQGWVLKEAEYLVE
REVDLERDRVLVLASENFHPGVIGIVASKLVDQYHRPVVMIAIDDKGIGKGSARSIKTFN
LHRAFGECQEHVIQFGGHAYAAGLTIEQERIDNFRQAINSVGHRILSEHHLIPEISWDIE
LELSQIDWKFYKEVSKLEPFGQLNPSPIFISKSVTLKDFRKIGKEKNHVRFKVTQGKSRI
EVIGFLMAHAFAGLKDGDTLDIVYQLHRNDFSGSAKLELKLLDFRV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattcaaaaataacagaaccggattcattgtcccgactcaacaagcggtggtgt
caaaacccggtggatgcaaaggcagccgcttcgcttgaggaagcgcttcgagtgtctcgc
actctcgctcatttgcttgccgggcgcggtcttgccgaaatcgaggtggcccggttcttc
ctcgacgcttctctcgataatttgcacgatccctttttaatgaccggcatgcagcaggcg
gcagaacgggtttgccaggccgtgaatgccggtgagcagatcacggtgttcggcgactac
gatgttgacggggtgacctccgccgcgttgatggtgcattttttccgcgagcttggcgca
ccgatcgactactacctgcccgaccgtaaacaagaaggttatggggtcaacaacgccgca
ctgaaagaaataaaagaccggggttccggattggtcatcacagcagactgcgggatcaca
gccgtaaaagaaactgagtacgctaatggactcggactcgatgtgatcatcaccgatcac
catcaggtgggggatgaaggtctgcctcctgccatcgccgtgctcaatccgcatcaaccg
gactgcacctatccctttaaatttttgtcgggtgttggcatcgttttcaaactggccgca
gcgatccgtcgggctctccacgaaaaaggatgggaaaaagatcgcctgccgaatttaaag
cagcacctcgatttattcacgctcggaacaattgccgatcttgcaccactcaccggggaa
aaccacgtgctcaccgtgcacggactcgaagccgtgcgcaccacgcagaaaccgggcctc
gttgcgctcaagtcggtttcagggtgcagcggcaggatcgacgcgttctcaatcggtttt
ggtttaggcccgcgtctcaacgcggccgggcgcatgggcaaagcggataccgggttccac
ctgctggtggcggacgatctcaacgccgcgatggagcaggcgaagggtttggatgacatc
aatacaaagcgtaaggaaacacagggctgggtgctgaaagaagcggagtatcttgtcgag
cgcgaagttgatcttgagcgcgatcgtgtgctggtgctggcttcggaaaattttcatccc
ggggtcatcggcatcgtcgcctccaaactggtcgatcaataccatcgtccggtggtgatg
atcgcgattgacgataaaggcattggcaagggctcggcccgcagtatcaaaacgttcaac
ctgcaccgtgccttcggtgaatgtcaggaacatgtcatccagttcggggggcatgcctac
gctgccggactcaccattgaacaggagcgcatcgacaattttcgacaggcgatcaattcg
gttgggcaccggattttaagtgaacaccatctgattcccgagataagttgggatattgag
ctggaactgtcgcagattgattggaagttttataaagaggtttcgaagctggaaccgttt
ggacaactcaatccatcgccaatatttatttcaaagagtgtgacgttgaaggatttcagg
aaaatcggtaaggaaaaaaatcacgttcgttttaaagtcacgcagggcaaatccaggatt
gaagtgatcgggtttttgatggcgcacgctttcgcgggattaaaagatggcgacacgctg
gacatcgtctaccagctgcaccgcaacgatttctccggctccgccaaactcgaactcaaa
ctactggattttagggtctaa
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