Neodiprion lecontei (redheaded pine sawfly): 107216911
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Entry
107216911 CDS
T09006
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
nlo03015
mRNA surveillance pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107216911
09122 Translation
03013 Nucleocytoplasmic transport
107216911
03015 mRNA surveillance pathway
107216911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107216911
03041 Spliceosome [BR:
nlo03041
]
107216911
03009 Ribosome biogenesis [BR:
nlo03009
]
107216911
03012 Translation factors [BR:
nlo03012
]
107216911
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107216911
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107216911
mRNA cycle factors
Stress granule specific factors
107216911
Spliceosome [BR:
nlo03041
]
Complex C
Other components
EJC/TREX
107216911
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
90S particles
Helicases
107216911
Translation factors [BR:
nlo03012
]
Eukaryotic type
Initiation factors
eIF-4
107216911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25
UvrD-helicase
AAA_30
TniB
Motif
Other DBs
NCBI-GeneID:
107216911
NCBI-ProteinID:
XP_015509732
EnsemblRapid:
ENSNLCG00000002764
UniProt:
A0A6J0B6D5
LinkDB
All DBs
Position
7:complement(443607..447033)
Genome browser
AA seq
403 aa
AA seq
DB search
MSEVKSRRVAQSEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLCLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtaaagtcacgccgtgtcgcacaaagtgaagatttgtcgaacgtggagttt
gaaaccagcgaagatgtcgaggttatcccgacttttgataatatgggactccgtgacgaa
ctactacgagggatttacgcctacggtttcgagaaaccgtcggcaattcaacagcgatct
attaagccaattatgaaagggcgagatgtgatcgcccaagcacagtcaggtactggtaaa
acagccaccttttcaatcgccatattgcagtcgttggatacgcaggtccgtgagacccag
gttctctgtctgtctcccacacgcgagcttgctacacagatccaaaaagtgatattagct
ctgggtgatttcatgaatgtgcaatgccacgcctgtatcggaggtaccaatttaggcgaa
gatatcagaaaattggattacggacaacatgttgtatccggtactccaggtcgagtattt
gacatgataaaacgcagagtattgagaacaagagcgataaaaatgttggttctggatgaa
tcggacgagatgctcaacaagggattcaaagaacagatctacgatgtctatcggtatttg
cccccggctacccaagttgtactagtttccgctacgctaccccacgagatccttgagatg
accagcaagtttatgactgaccctatacgtattcttgttaaacgcgatgaattgaccctg
gaaggtatcaaacaattttttgttgcggtcgagcgtgaagaatggaaatttgatactctg
tgcgatctgtacgatacccttacaataacacaagctgttattttttgtaacacaaaacgc
aaggtagactggcttacagaaaagatgcgcgaagcgaacttcaccgtatgttccatgcat
ggagatatgccacaaaaagaaagggacaacataatgaaggaatttagatctggtcaaagt
cgagtattaatcacaacggacgtgtgggctagaggaatagatgtacaacaagtatcattg
gtgataaactatgatctacctaataatcgagaattgtacattcaccgaattggacgttcg
ggacgttttggaaggaaaggtgtatccatcaacttcgtaaaaaccgatgacatcagaatt
ctacgtgatattgagcagtattattccacgcagattgatgagatgcccatgaatgtcgcc
gatttaatctaa
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