KEGG   Neodiprion lecontei (redheaded pine sawfly): 107220303
Entry
107220303         CDS       T09006                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03082  ATP-dependent chromatin remodeling
nlo03083  Polycomb repressive complex
nlo04213  Longevity regulating pathway - multiple species
nlo04330  Notch signaling pathway
nlo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107220303
   03083 Polycomb repressive complex
    107220303
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    107220303
   04350 TGF-beta signaling pathway
    107220303
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    107220303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nlo03036]
    107220303
Enzymes [BR:nlo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107220303
Chromosome and associated proteins [BR:nlo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107220303
   HDAC complexes
    Sin3A-HDAC complex
     107220303
    BRAF-HDAC complex
     107220303
    REST complex
     107220303
    SHIP complex
     107220303
    MiDAC complex
     107220303
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107220303
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107220303
  Chromatin remodeling factors
   NuRD complex
    107220303
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107220303
NCBI-ProteinID: XP_015514331
EnsemblRapid: ENSNLCG00000010417
UniProt: A0A6J0BIM8
LinkDB
Position
4:15979024..15984745
AA seq 492 aa
MSTAPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAIVEDSEADEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLEKGQESGDSDLKKEDDIKSEIKENEKDDKANVT
SEEVKKDGSVNP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtccacagcaccgcacagtaagaagcgggtctgctactactacgacagtgatattgga
aactattactatggccaaggacatcccatgaaaccgcatcgcataaggatgacccataat
ttgttacttaattatggactgtacagaaagatggaaatttatcgaccacacaaagctacc
gccgatgaaatgaccaagtttcacagcgacgagtatatcaggttcctcagatcaatcagg
cccgacaatatgtctgaatacaacaaacaaatgcaacgcttcaatgtgggggaagattgt
ccggtgtttgacggcttgtacgagttttgccagctatcagcaggaggctcagtagcggct
gcagtcaagttgaacaaacaggcatcagaaatttgcataaattggggaggcgggctgcat
catgccaagaaaagcgaggcctctgggttttgctatgtcaacgacatagtccttggtatt
ttagaattgctcaagtatcatcagagagtattatatattgacatagacgttcaccacggc
gacggcgttgaagaagccttttacacaactgatagggtaatgacagtatcgtttcacaaa
tatggagaatatttccctggcactggtgaccttcgagatattggtgcaggaaagggtaag
tactacgcagtcaatattcctctgagggatggaatggacgatgaaagttacgaatcgata
tttgtaccaataatatcgaaagttatggagacgtttcaaccgtctgcagttgttctgcaa
tgtggtgctgattcgttaacaggtgacagacttggctgcttcaatctaacggtccgagga
catggcaaatgcgtcgagtttgttaaaaagtacaatttaccgttcctcatggtaggtggc
ggtgggtacaccatccgtaacgtttctaggtgttggacatatgaaacatcagtagctttg
ggatcagaaatagccaatgaactgccctacaatgattactttgaatatttcggtcccgac
ttcaaactgcacataagtccctctaatatggcgaaccagaatacacctgaatatctggag
aaaatcaaaacgagattattcgaaaatttgaggatgctacctcacgcaccaggggttcaa
gttcaggccattcctgaagacggcgccattgtcgaggactctgaagccgacgagaaagta
aacccagacgaaagactgccgcagagagatttagacaaacgaatacagcacgaaaatgag
tatagcgatagcgaagacgagggagatggtgggagaagggataacagatcattcaagggc
tccagaaaaaggccgcgactcgagaaagggcaagaaagcggtgattcagatttgaaaaaa
gaagatgatatcaaatcagagataaaagagaacgagaaagatgacaaagccaacgtaacg
agcgaagaggtaaagaaagacggaagtgtgaatccctga

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