Neodiprion lecontei (redheaded pine sawfly): 107220303
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Entry
107220303 CDS
T09006
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03082
ATP-dependent chromatin remodeling
nlo03083
Polycomb repressive complex
nlo04213
Longevity regulating pathway - multiple species
nlo04330
Notch signaling pathway
nlo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107220303
03083 Polycomb repressive complex
107220303
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107220303
04350 TGF-beta signaling pathway
107220303
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
107220303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107220303
Enzymes [BR:
nlo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107220303
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107220303
HDAC complexes
Sin3A-HDAC complex
107220303
BRAF-HDAC complex
107220303
REST complex
107220303
SHIP complex
107220303
MiDAC complex
107220303
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107220303
Heterochromatin formation proteins
Other heterochromatin formation proteins
107220303
Chromatin remodeling factors
NuRD complex
107220303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107220303
NCBI-ProteinID:
XP_015514331
EnsemblRapid:
ENSNLCG00000010417
UniProt:
A0A6J0BIM8
LinkDB
All DBs
Position
4:15979024..15984745
Genome browser
AA seq
492 aa
AA seq
DB search
MSTAPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAIVEDSEADEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLEKGQESGDSDLKKEDDIKSEIKENEKDDKANVT
SEEVKKDGSVNP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagcaccgcacagtaagaagcgggtctgctactactacgacagtgatattgga
aactattactatggccaaggacatcccatgaaaccgcatcgcataaggatgacccataat
ttgttacttaattatggactgtacagaaagatggaaatttatcgaccacacaaagctacc
gccgatgaaatgaccaagtttcacagcgacgagtatatcaggttcctcagatcaatcagg
cccgacaatatgtctgaatacaacaaacaaatgcaacgcttcaatgtgggggaagattgt
ccggtgtttgacggcttgtacgagttttgccagctatcagcaggaggctcagtagcggct
gcagtcaagttgaacaaacaggcatcagaaatttgcataaattggggaggcgggctgcat
catgccaagaaaagcgaggcctctgggttttgctatgtcaacgacatagtccttggtatt
ttagaattgctcaagtatcatcagagagtattatatattgacatagacgttcaccacggc
gacggcgttgaagaagccttttacacaactgatagggtaatgacagtatcgtttcacaaa
tatggagaatatttccctggcactggtgaccttcgagatattggtgcaggaaagggtaag
tactacgcagtcaatattcctctgagggatggaatggacgatgaaagttacgaatcgata
tttgtaccaataatatcgaaagttatggagacgtttcaaccgtctgcagttgttctgcaa
tgtggtgctgattcgttaacaggtgacagacttggctgcttcaatctaacggtccgagga
catggcaaatgcgtcgagtttgttaaaaagtacaatttaccgttcctcatggtaggtggc
ggtgggtacaccatccgtaacgtttctaggtgttggacatatgaaacatcagtagctttg
ggatcagaaatagccaatgaactgccctacaatgattactttgaatatttcggtcccgac
ttcaaactgcacataagtccctctaatatggcgaaccagaatacacctgaatatctggag
aaaatcaaaacgagattattcgaaaatttgaggatgctacctcacgcaccaggggttcaa
gttcaggccattcctgaagacggcgccattgtcgaggactctgaagccgacgagaaagta
aacccagacgaaagactgccgcagagagatttagacaaacgaatacagcacgaaaatgag
tatagcgatagcgaagacgagggagatggtgggagaagggataacagatcattcaagggc
tccagaaaaaggccgcgactcgagaaagggcaagaaagcggtgattcagatttgaaaaaa
gaagatgatatcaaatcagagataaaagagaacgagaaagatgacaaagccaacgtaacg
agcgaagaggtaaagaaagacggaagtgtgaatccctga
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