Neodiprion lecontei (redheaded pine sawfly): 107225237
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Entry
107225237 CDS
T09006
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107225237
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107225237
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
zf-CCCH_4
Torus
zf_CCCH_4
AAA_22
zf-CCCH
zf-CCCH_2
AAA_19
ATPase
nSTAND3
AAA_29
UBA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107225237
NCBI-ProteinID:
XP_015521123
UniProt:
A0A6J0C3K9
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Position
6:complement(27132432..27138805)
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AA seq
1271 aa
AA seq
DB search
MDHHSAQLMEDIVLEDRRPPKSNSKNTSTKKSTKDTGKIQNVPRTSVPTQRVPDKSNNVP
TNLKVEMQMLRITDDSERQLYETLKHIYGTKFRLADASEFKDQKSNLGKQYWMERGNLVI
KGVVDYSSKENTPKTHEQITRQFATSKLESYSFHTSHCIEALEHAKGNVGSALEILFSKY
YGVENLQRMNNIEDISKDELLERQNDEKMALESIYGESFVEKIKNRIWIINLKLDYLVEE
KKDKTTVSKPVKIDKNICRLFASGSCRFGNKCKFVHRQPDVVQQTIPKDDALFTLEIRFP
DHLTYPYDPPYFYFYKNTPPYPKLNCLRIARRLYNEALEHCVDGAPSIFSAVSILENEFE
IQSYLVESKEQFLDKDDPLFPKSINSEHDQHIPTHYKKGSTNRRNRDNVSWKEISKQDDE
IRTKFMEKQKSPRYLKMKEARRKLPAWSKMNEILDTIHESQVTVISGETGCGKSTQVPQY
LLDDWIINRSETNREHVEIVCTQPRRISAIGVAERVAAERDERIGNTVGYQIRLESKVSS
TTRLTFCTTGILLQRFSGDPDLSSVTHVIVDEVHERSAESDFLLMLLKELLSKRPDLKII
LMSATLKADTFSTYFGNTPTLDIPGRTFPVEQIFLEDILERTGFVVEENSRFTRRIKGGF
EKLETELESADVEAMAGVYPKDNILDENLVLAQLMARYEGYSKQTYKNLYILDPEKINCE
LIENVLEWIVSGDHDYPRTGSILVFLPGIAEIMSLKDALHNNKSLSPKSGNFIIVPLHSS
LSSEDQSLVFKKMKDGVRKIVLSTNIAETSVTIDDCVFVVDTGKMKETRFNSNQNMESLD
MCWVSRANAMQRKGRAGRVMPGVSIHLYTSHRFKHHFLAQPIPEILRIALESLLLRIQIM
SKGKVVDLHDILSKVLEPPSEDSISDAIKRLQDVGAIAPDCSLTPLGHHLAALPLDVRIG
KLILFGAIFCCVDSALTIAACLSHKSPFVAPFDKKHELDAKKKDFATANSDQLTILKAYK
KWLDACSHSSYAGQVFANENYLSTRTLQTLADVKHQLLELLVSIGFVPVDVGRRRAGDDR
ILEITGPAMNSNNENYKLLQGLLCAALYPNVAKVFTPEKSFQLQSAGAIPRQPKPEELKF
KTKDGYVNIHPSSVNFTVGHFSSPYLVFQEKIKTSRIFIREVSMVPMLALVLFSGYGIDI
ELHNGTFILSLEDGWIMFSVESHRVAQLLQRMRVELVKLLEEKMQDPLLNLVHHSKGKKI
IQTIVNIVTRD
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcacagtgctcagttaatggaagacatagtattggaagatagaagaccacca
aagagcaatagcaaaaatacttcaactaagaagtcaaccaaggacaccggtaaaatacag
aacgttccaaggaccagtgtgcccacgcaacgagtccctgataaatcaaataatgtgcca
acgaatcttaaagttgaaatgcaaatgctgagaattacagacgattcagaaaggcaactt
tatgaaacgttgaaacatatatacggcactaaattccgacttgcggatgcctcagaattc
aaggaccaaaaatcaaacttgggcaaacaatattggatggaacgtggaaatttggtaata
aaaggtgttgttgattattcttccaaagaaaatactcccaagactcatgaacaaatcacc
agacaatttgcaacttcgaaactcgaaagctacagctttcacacatcacattgcattgaa
gcattggaacatgcgaaaggaaatgtcggaagtgcgttagaaatattgttttcaaagtac
tacggagtagaaaatctacagcgaatgaataatattgaagatatatccaaagacgaatta
cttgagagacaaaacgatgaaaaaatggctctcgagtcaatatatggagagtcgtttgtt
gagaaaataaaaaatcgaatttggataatcaacttgaaactagactatctggtagaagaa
aaaaaagataagacaacagtctcaaaacctgtcaagatagataaaaatatttgtcgttta
ttcgccagtggaagttgcaggtttggtaacaagtgtaaatttgtacacagacaacctgac
gtcgttcaacagactataccaaaggatgatgctctttttactttggaaataagatttcca
gatcatctgacctacccctacgatccgccatacttttatttttacaagaatacgcctcct
tatccaaagctaaactgtttacgaatagcaagacgtctttacaacgaggcattggagcac
tgtgtggatggtgctccgtcaatattttcagcagtatctatattagaaaatgagtttgaa
atccagtcatacttggtagaaagtaaggagcaattcttagacaaagatgatccactattc
ccaaaatcgataaacagcgaacatgaccagcatataccgacacactacaaaaaagggtct
acaaatagacgaaacagagacaatgtatcgtggaaagaaatttctaaacaagatgacgaa
ataagaactaaattcatggagaagcagaagagtccaaggtacctgaaaatgaaggaagct
cgaagaaaactgcctgcttggtcaaaaatgaatgaaatcttagacactattcatgaaagt
caggtgactgtgatttctggtgagaccgggtgtggtaaaagtactcaggtgcctcaatat
ttactagatgattggataataaatagatcagaaacaaacagagagcatgtcgaaatagtt
tgcacacagcctcgtagaatcagtgctattggagttgcggaaagagtggctgcggaacga
gacgaacgtataggaaacactgtaggatatcaaatacgattagaaagtaaagtgtcttcc
acaacaagattgaccttttgcacaacaggaatcttgttgcaaaggttttcaggagatcca
gatctgtcttctgtgactcatgtcattgtagacgaggtacacgagagaagtgctgaaagt
gattttttgttaatgttattgaaagaactgctctccaagaggccggatttgaagattatt
ctcatgagtgccaccctcaaagctgatacattctcaacttactttggaaatactcctact
ttggatattcctggaagaactttccctgtcgagcaaattttcctggaagatattctggaa
agaactggctttgtagttgaagagaattcacggtttactcgaaggatcaaaggcgggttt
gaaaaactagaaactgaattagaatccgctgatgttgaagctatggctggtgtctacccc
aaagataatatattagacgaaaatctggtccttgcccaactcatggcaagatatgaagga
tattcgaaacaaacttacaagaatctgtacatcttggatccggagaaaattaattgtgag
ttgattgaaaatgttttagaatggattgtcagcggagaccatgattatccaaggactggt
tcaatactggtattcctaccaggtattgcagagataatgtcactgaaagacgcgcttcat
aacaataagtcactatcgccaaaaagtggaaattttattatcgtaccgttgcactcgtct
ctatctagtgaagatcagagcttagtgtttaagaaaatgaaagatggtgttagaaaaatt
gttctcagtacaaatatagctgaaacgtcagtaacgatagacgattgcgtgtttgttgtg
gatacaggaaaaatgaaggaaacgagattcaattcaaatcagaatatggaaagtttagat
atgtgttgggtctcccgagcaaatgccatgcaaaggaaaggacgagctggccgagtcatg
ccaggagtctccatacatctttacacatcacacagatttaaacatcatttcttggcacag
ccgattccggaaatattgcgaatagctttagaatctttgctgttgcgaatccaaatcatg
agtaaaggaaaagtagttgatcttcatgatatactgagcaaagtgctggagcctccatct
gaagacagtatttcagatgcaataaaacgtttacaagatgtaggagctatagctccagat
tgtagtttaactccattaggtcaccacttagctgccttacccctcgacgttcgcatagga
aaactaattcttttcggagctattttctgttgcgtcgactctgcattaacaattgcagcc
tgcttgtcccataaaagtccttttgttgcgccatttgacaaaaagcatgaacttgatgca
aagaaaaaggattttgctacagcaaattcagatcaattgactattctaaaagcttacaag
aaatggctagatgcttgttcacatagctcgtatgcgggtcaagtttttgctaacgagaac
tatttatctacgagaacactacaaacattagctgatgttaaacatcaacttttagaactt
ctggtatcaattggctttgttccagtcgatgtaggaagacgacgagcaggagatgacagg
atcttggaaataacgggaccagcaatgaattcgaacaacgaaaattataaattgctacaa
ggacttttgtgtgctgccttgtacccaaacgtagccaaagttttcacgccagaaaaatca
tttcaactacaatcagctggcgctataccaagacagcccaaaccagaggagttgaagttc
aaaactaaagatggatacgtgaacatacatccttcttcggtcaacttcacagtcggtcac
ttttctagcccatacttagtttttcaagaaaaaattaagacgagcagaatatttataagg
gaagtatcaatggtaccgatgctggcgttagtcttgttctctggctatggtatcgatata
gagttacacaatggaactttcatcttgtcactagaagatggctggataatgttcagcgtt
gaatcgcacagggttgctcaactgttgcaacgcatgcgagttgaattggttaaacttctc
gaagaaaagatgcaggaccctttattgaatctggttcaccactcgaaaggaaaaaaaatt
attcaaaccatcgtgaatatagtaaccagagactag
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