Nilaparvata lugens (brown planthopper): 111047743
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Entry
111047743 CDS
T07276
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03013
Nucleocytoplasmic transport
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111047743
09122 Translation
03013 Nucleocytoplasmic transport
111047743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111047743
03041 Spliceosome [BR:
nlu03041
]
111047743
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111047743
Spliceosome [BR:
nlu03041
]
Complex C
Other components
EJC/TREX
111047743
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111047743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
UCR_hinge
RRM_3
Motif
Other DBs
NCBI-GeneID:
111047743
NCBI-ProteinID:
XP_039284401
LinkDB
All DBs
Position
5:47002604..47027891
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AA seq
687 aa
AA seq
DB search
MASKHCSFELMRSQLQESLKSCSEKKNLEPLKKSFDSLNTSDSEKRSALDQVLRDYLLVL
FSASASDSDDRISWEGYLQLCIEACRKDMATTTMPVVLLGDIFDALTLDKCERLFTFVED
NVSIWKEDLFFSACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIV
SDFNVENVTEFGSDEPMDTKDADDKSEDDDSPDKIKIDYNLYTKFWKLQDFFCNPNLCYN
KVQWKLFSSHTSCVLSAFKSFKLYDEGKRSNQVVNVDEPLSEHYFAKFLTNQKLLELQLS
DVSFRRYVLLQFLILFQYLNSRVKFKADTFELKSDQTEWVTETTQLIYTLLQETPPDGVK
FSTTVKNILQREEFWNSWKNEGCPELQRPSAPADDDAVTTSEVKRRSVGCQPQQKRPHKR
LGQIIKDATAHKKFVFGNPELNKLWNHMPDNLEACRSKDRDFLPSLESYFEEAIEQTNPA
AMLEEEYKKVNDCNFGWRALRLLARRSPYFFSQSNILIAKMPDFLENMILRISKDKPTES
AEVKMELTEVKQEIQEDMHTIEVNDGDTEDEELMKTDEKKEEVTATHNDSSKLMKSLVPE
LVPLIPLENWKKLAIKLGFADNTIDYFEGMSLGRRKEHQTDCIKEMLKYWCETDDCSIEN
LTYTLEGLEFTEAVEFLKPHHPNPPTD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaagcattgttcatttgagctaatgcgttcgcagcttcaggaatctttgaaa
tcttgttcagaaaagaagaatcttgaaccattgaagaaatcctttgattccttaaacaca
agcgacagtgagaagcgatcagcgttggatcaggtgctgagagactacctgctcgtactg
ttctcggcgtctgctagcgatagcgacgaccgcatatcatgggaagggtacttgcagttg
tgcatagaggcgtgcaggaaagacatggccaccacaacgatgcccgtcgtcttgcttggc
gacattttcgatgcactcactctggacaagtgcgagcgcctcttcacctttgttgaggac
aacgtctccatatggaaggaggatctgttcttcagcgcctgcaaaaacaacctgcttcgt
atgtgtaacgatctattgagaaggttgtcccgatcacagaatactgtattctgtggccga
attctgctctttctggcgaaattctttccattctccgaacgatccgggctgaacattgtc
agtgacttcaacgttgagaatgtcactgaattcggatctgacgaaccaatggacactaaa
gatgctgacgacaagtcagaagatgatgattctccagacaaaataaaaattgactacaac
ttatacacaaaattttggaaactacaggacttcttttgtaaccccaatctatgctacaac
aaagtccaatggaaattgttttcaagtcatacatcttgcgtgctatctgcatttaaaagc
ttcaaactttacgatgaaggaaaacgttctaatcaagtagtgaacgtagatgaacctctc
agtgagcactattttgctaaattcctgaccaatcagaagctattggaattgcagttgagt
gatgttagcttcagacgctatgtgctgctccagtttctcatccttttccagtacctcaat
tctcgagtcaagttcaaagctgatacgtttgaattgaagtcggatcaaacggagtgggtg
acggagacaactcaactgatctacactctgttgcaagagacacctccggatggcgtcaaa
ttctccaccacggtcaagaacattttgcagagggaagagttctggaacagctggaagaac
gaaggctgtccggagctgcagcgaccgtcggctccagctgacgacgacgcagtgacgacg
tccgaagtgaagagacgcagcgttggctgtcagccgcaacagaagcgaccccacaagcgg
cttggccagatcatcaaggacgcgactgcccacaagaaattcgtgttcggaaacccagaa
ctgaataaactgtggaatcacatgcctgataatcttgaggcctgccgctccaaagataga
gatttccttcccagtctcgaatcgtatttcgaggaagccatcgagcagacaaatccagcc
gctatgcttgaggaggaatacaagaaagtgaatgactgcaatttcggctggcgtgctctg
agactactggctcgtagatctccatatttcttttcgcagagtaatattcttattgccaaa
atgcctgatttcctggagaacatgatattacgcataagcaaggataaaccgaccgaatca
gctgaagtgaaaatggagctgacggaagtgaagcaggaaatccaggaggacatgcacacg
atcgaagtcaatgacggagacaccgaggacgaagaactcatgaagaccgacgaaaagaag
gaagaagttacagctacccataatgattcatcaaagctgatgaaaagtcttgtaccggag
ctagttcctctaattccacttgaaaattggaaaaagttggctatcaagttgggtttcgcc
gataatacgatcgactactttgaaggaatgtcgctgggtagacgcaaagagcaccagacc
gattgcatcaaagagatgctgaaatactggtgcgaaacggacgattgcagcattgaaaac
ctcacctacactctagaaggtctcgagttcacagaggcagttgagtttctcaagcctcac
catcccaatccacctactgattag
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