Nilaparvata lugens (brown planthopper): 111048235
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Entry
111048235 CDS
T07276
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111048235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111048235
Enzymes [BR:
nlu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111048235
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111048235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
DNA_ligase_A_N
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111048235
NCBI-ProteinID:
XP_039278065
LinkDB
All DBs
Position
2:93556906..93584159
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AA seq
754 aa
AA seq
DB search
MKHAEHNPRGFDDELLSMIQQMTPLEIKWLTRLLLKEMKLGMGHKKVLFAYHRDAIDLFN
VSFSLQKVCEKLYDPDRRLHEVEVCMFEPFRPMLAERCDVQKVDKQLMASPYHFLETKWD
GERCQLHYNAGDFKYFSRNGFEYTDSFGPNDRIGSITPRLCKQLSPMVESVILDGEMMGW
NTKLKTFGSKGMNFDVKSLKLGHVHQPCFCAFDVLLLNGNVLTNKPLKERLNILSTVFTP
LDGVIMLTESIQVSSRADVMKSLNDAIDNREEGIILKHPESIYKPNLRTGGWYKIKPEYT
DGAMTDLDLLIIGGYYGEGRRKGLVSHFLLGVAAVKEESMGDPKDFLAVGRVGSGCTVGE
LEELGAKLAEHWNKTRAKAALPRGLLWTKEKPDLWIEPAKSCILQVKATEIVRSDAYPVN
FTLRFPRIEKVRYDKRWQDCLTLKEFHELRTAASGKLCSTHIQSTSDLPKSKRIKLSQPV
AAVSLDRISFDVKRVKRVTNLFEGKEICVFSGDTEITKKEIETKIAENGGKVTQNPGTQT
HLIICGSEKNSIRVRNAVSSGKHDIVTVSWFLQCVQLGYLVDFHPKDLICMCEDTSERMK
IMYDEYGDSFTEPTTLENLKEVLSRVERRNNEEEPLSAKSKQKLDNLLFDGHNPYAIFRQ
YCSYFFNYNPEDSNHFANPLNVAAIKFKYLGGTISNDIDERTTNVILHSSALNHLEELRA
TCNSTGQKISIVSEKWILGSWSKQRCLDEELFQL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgctgagcataatccacggggattcgacgatgaactgctgtcgatgattcag
cagatgacgccattagagattaagtggttgacacgtttactgttgaaagaaatgaaactt
ggcatgggccacaagaaagtgcttttcgcgtaccaccgtgatgctatcgatttgttcaat
gtgtcattcagccttcaaaaggtgtgtgaaaagctgtatgaccccgacaggcgtttgcat
gaggttgaagtgtgtatgttcgagccattccggcccatgttggctgaacgctgtgatgtg
cagaaagtcgacaagcagctgatggcgtctccctatcatttcctcgagacaaagtgggat
ggtgaacggtgccaactgcattacaatgcgggtgacttcaagtatttctctaggaatgga
ttcgaatacaccgactcatttggtccaaacgatcgaataggttctataacacctcgcctc
tgcaagcagttgagtccgatggtggagagtgtcattcttgatggcgaaatgatgggctgg
aataccaaactgaaaacattcgggtccaaaggaatgaatttcgatgtaaagtcgttgaaa
ctcggccatgttcatcagccctgcttctgcgcatttgatgtactgctactgaatggaaac
gtcctgacgaataaaccgttgaaggaaagactgaatattttatctactgtatttacgcct
ttggatggagttatcatgcttactgaaagtattcaagtctctagtagagcagacgtaatg
aaatccttgaatgatgctattgacaacagagaagaaggaattattctgaaacacccagag
tcgatttataagccaaatttgcggaccggaggatggtataaaatcaaaccagagtataca
gatggagcgatgacggacttggatttgctaataattggcggttattatggagagggtcgg
agaaagggattggtcagtcacttcctgcttggtgtagcagcagtcaaggaagagtccatg
ggggatccaaaggatttccttgctgttgggagggttggatcagggtgcacggtgggagaa
ctggaggagttgggagctaaactggccgagcactggaataaaacaagagctaaggctgct
ctgccgcgcggattgctttggactaaggagaagccagatctgtggatagagccagctaaa
tcctgcattctacaggtgaaagctacagaaatcgttagaagcgacgcttatccagttaat
tttactctgagatttcctcgaatcgaaaaagtacgatacgataagagatggcaggactgc
ctcacattgaaagagttccatgaactacgtacggcagctagtggtaaactatgctcaacg
cacatccaatccacatcagatcttccaaaaagtaaacgcatcaaattgtcgcagccggtg
gcagcggttagccttgatcgcatcagcttcgacgtgaagagggtgaaacgtgtcacaaat
ctgttcgaaggcaaggaaatctgtgttttctccggcgatacggaaattacgaaaaaggaa
attgaaacgaaaattgctgagaatggtggaaaagttactcaaaatccaggtacgcagaca
catctcattatctgcggttccgagaagaattcgatcagagtgcgaaatgcagtttcgtct
gggaagcacgacatcgtgacagtgagctggtttctgcaatgcgtccaattgggatacttg
gttgattttcaccccaaagatttgatctgcatgtgtgaagatacaagtgagagaatgaaa
ataatgtatgatgagtatggtgacagttttactgagcctacaactttggaaaacttgaaa
gaagtcttgagtagagttgaaagaaggaacaatgaagaggaaccattgtctgcaaaatcc
aaacaaaaactggacaatctactgtttgatggtcacaacccatacgcaatttttcgccaa
tattgttcatattttttcaattataatcctgaggattcgaaccacttcgcaaatcccctg
aatgtcgccgctatcaaattcaagtacttgggaggaactatctccaatgacatagatgag
aggacaacaaatgtcatacttcattcaagtgctttgaaccatttagaagaattgagagca
acctgcaactcgaccgggcaaaagatatcgattgtaagcgaaaaatggattctaggatct
tggagcaagcagaggtgcctcgacgaagaactttttcaactctag
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