Nilaparvata lugens (brown planthopper): 111050270
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Entry
111050270 CDS
T07276
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03022
Basal transcription factors
nlu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111050270
09124 Replication and repair
03420 Nucleotide excision repair
111050270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111050270
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111050270
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111050270
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111050270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
111050270
NCBI-ProteinID:
XP_039283626
LinkDB
All DBs
Position
5:12250371..12271040
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AA seq
438 aa
AA seq
DB search
MTAVEEEDGKEYRWETGYEKTWEAIREDDEGLLEGAVAEMVQRAKRRRLEALSAAAGHVR
LGMMRHVIVVVDCSDAMLDQDLKPTRQLCATKLLCSFIDEFFDQNPIGQLGVVVTRNKRA
ERASQLGGNAQKHVAAVQAHLSRPEYCAGEPSLQNALELALTSLRSLPTHASREIVVLLA
SLTTCDPGDITATIESLKSCNVRVSVIGLAAEVRVCAALCRETGGSYSVAMDDRHLRDLL
REHVLPPPSLKARAAEDEAALVKMGFPHSANAQQGQLSMCMCHLDSPATEPADTSASASA
SASGCKLRAGGYFCPQCRSNYCQLPAECRVCGLTLISAPHLARSYHHLFPVRPFSQRPAV
GAETGEGEGAAAEAGVRAGWCFACRKSLAAGAVGDKFVYECEKCHEVFCLDCDLFIHDTL
HTCPGCTTDQRTFQQLST
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgtcgaagaagaagacggcaaagagtaccgttgggagaccggctacgagaag
acatgggaggccattcgggaggacgacgaaggccttctagagggcgccgtggccgagatg
gtgcagcgcgccaagcggcgacgactggaagctctgtcggctgcggctggccatgtgcga
cttggtatgatgcgacacgtaatcgtggtcgtcgattgctctgatgccatgctcgatcag
gatctcaaacccaccaggcagctgtgcgctactaagttgttgtgcagcttcatagacgag
tttttcgaccagaatccgatcggccaactgggtgtggttgtgacgcgcaacaagcgagcg
gagcgagcctcccagctgggcggcaatgctcaaaaacacgtggcagctgtgcaggcgcat
ctctcccggcccgagtactgcgcaggtgaaccttcgctgcagaacgcactggagttggcc
ttgacttcactgcgcagcctgcccacgcatgctagtcgcgagattgtcgtgctgttggca
agcctgaccacatgtgaccccggtgacatcactgctactattgagtcgctgaaatcgtgt
aacgtgcgcgtgtcggtgatcgggctggcagcggaggtccgcgtgtgcgcggcgctgtgt
cgcgagacaggtggctcctactctgtggccatggacgaccgccatttgagggacctgttg
cgcgaacacgtgttgccccctccctcgctcaaggcgcgtgctgccgaggacgaggcggcg
ctcgtcaagatgggcttcccgcactcggccaacgcccaacagggacagttgagcatgtgc
atgtgccatctagactcgcccgccacagagccggcggacacttccgcctccgcttccgcg
tccgcgagcggctgcaagctccgcgcgggcggctacttctgtccgcagtgccgcagcaac
tactgtcagcttcccgccgaatgccgcgtctgcggtctgacgctgatttccgcgccgcat
ctggctcgctcctaccaccacctgtttcccgtccgcccgttcagccaacggccggcggtg
ggagcggaaacgggagagggagagggagcggcagcagaagcgggagtgagagcaggatgg
tgttttgcgtgtcgcaagtcgctggccgctggagcggttggcgataagtttgtgtacgaa
tgcgagaaatgccacgaggtgttttgtttggactgcgacctgttcattcacgacactctg
cacacgtgtccaggctgcaccaccgatcagcgtactttccaacagctgtccacctga
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