Nocardioides marmotae: HPC71_06475
Help
Entry
HPC71_06475 CDS
T09088
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar00550
Peptidoglycan biosynthesis
nmar01100
Metabolic pathways
nmar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPC71_06475 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPC71_06475 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nmar01011
]
HPC71_06475 (mrdA)
Enzymes [BR:
nmar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPC71_06475 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nmar01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPC71_06475 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QKE00760
LinkDB
All DBs
Position
1339381..1341516
Genome browser
AA seq
711 aa
AA seq
DB search
MSAAEAASRRSRLRLLVVQALVFSLFATLFARLYYLQVVSGEQYTAQAANQSVRDIVVQP
QRGLIVDDMGRPLVTNRTAWMVSVDRSMLAKMDAGQQDKLVERVAQVTGVRAGMVRKRLV
TCGDDGSVSGECWNGSPYQPVPIASDVEQSVALRILEQPEDFPAVIAEQQTVRNYPRPYG
VNLAHVLGYLSPITEDELTSAEDDDDDSVNGASSVGRAGVEKQYDAWLRGMPGYRSVAVD
SMGRVLGDDGEVEATPGSTLVTSIDARVQGLVEKELAGAIAKARTEVDSVTGRPYEADSG
AVVVMEADTGRIVAMASQPTYDPGVWVGGISKKQLARLYSEAAGTPLLGRATQGQFAPGS
TWKPFMTAAAMTNGYGPDTRLACSSGFQVGNRVFKNYESGAYGSIGFDKALEVSCNTFFY
RIGYDYWQRFGSDVADVDAKDPLVEEAKVFGFGAETGIDLPGEASGRIADRTWKRAYYDS
MKDYYCGIAEKPQDEKTSDFVYRFAREFCVEGFAYRAGDAVNFAIGQGDTIVTPLQLARA
YAALANGGTLWAPRVGKAIVDPSGRTVKEIKPKKVGSVDLPKSVLSYIDTALLSVSSRGT
MAWKLPGFPLEQVRIRAKTGSAEVYGKQSTSWVASYTDDYVVVMMVSQGGTGSGRNGDSI
RRIYEALYGVEGQTVDPRQAFIPGTKPPQGLPTFTPDGSILPPGRRTEEDR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgccgaggccgccagccgccgcagccggctgcggctgctcgtggtccaggcc
ctggtcttctcgctcttcgcgaccctgttcgcgcggctgtactacctccaggtcgtcagc
ggcgagcagtacaccgcgcaggcggccaaccagtcggtccgcgacatcgtggtgcagccc
cagcgcggcctgatcgtcgacgacatgggccgccccctggtcaccaaccgcaccgcctgg
atggtctcggtcgaccgcagcatgctggccaagatggacgcgggccagcaggacaagctc
gtcgagcgggtggcccaggtcaccggcgtccgggccggcatggtccgcaagcggctggtc
acctgcggggacgacggcagcgtcagcggcgagtgctggaacggctcgccctaccagccg
gtcccgatcgccagcgacgtcgagcagtcggtcgcgctgcgcatcctcgagcagcccgag
gacttcccggccgtgatcgccgagcagcagacggtccgcaactacccgcgcccctacggc
gtcaacctcgcccacgtgctgggctacctcagcccgatcaccgaggacgagctgacctcg
gccgaggacgacgacgacgactcggtcaacggcgcctcctcggtcgggcgcgctggcgtg
gagaagcagtacgacgcgtggctgcgcggcatgccgggctaccgcagcgtggcggtcgac
tcgatggggcgggtgctcggcgacgacggcgaggtcgaggccacgcccggctcgacgctg
gtgacctccatcgacgcccgcgtgcagggcctggtcgagaaggagctggccggggcgatc
gcgaaggcccgcaccgaggtcgacagcgtcaccggccgcccctacgaggccgactccggc
gcggtcgtcgtcatggaggccgacaccggccggatcgtggcgatggccagccagccgacg
tacgaccccggggtgtgggtgggcggcatctccaagaagcagctggcccggctgtactcc
gaggccgccggcaccccgctgctgggccgcgcgacccagggccagttcgcccccggctcg
acgtggaagccgttcatgaccgccgcggcgatgaccaacggctacggccccgacacccgg
ctggcctgctcctcgggcttccaggtcggcaaccgggtcttcaagaactacgagtccggc
gcctacggctcgatcggcttcgacaaggcgctcgaggtctcctgcaacaccttcttctac
cggatcggctacgactactggcagcgcttcggctccgacgtcgccgacgtcgacgccaag
gacccgctggtcgaggaggccaaggtcttcggcttcggcgccgagaccggcatcgacctg
ccgggcgaggcgtcgggccggatcgcggaccggacgtggaagcgcgcctactacgactcg
atgaaggactactactgcggcatcgccgagaagccgcaagacgagaagacctccgacttc
gtctaccgcttcgcccgcgagttctgcgtcgagggcttcgcctaccgcgccggtgacgcg
gtcaacttcgccatcggccagggcgacacgatcgtcaccccgctccagctggcccgggcc
tacgcggcgctggccaacggcggcaccctgtgggcgccccgggtcggcaaggcgatcgtc
gaccccagcggccgcacggtgaaggagatcaagcccaagaaggtcggctccgtggacctg
ccgaagtcggtgctctcctacatcgacaccgcgctgctgagcgtcagcagccgcggcacc
atggcctggaagctgcccggcttcccgctcgagcaggtccggatccgggccaagaccggc
tccgcggaggtctacggcaagcagtcgacctcctgggtggcctcctacaccgacgactac
gtcgtggtgatgatggtcagccagggcggcaccggctcgggccgcaacggcgactcgatc
cgccgcatctacgaggcgctgtacggcgtcgagggccagaccgtcgacccccgccaggcc
ttcatcccgggcacgaagccgccccagggcctgcccacgttcacccccgacggctcgatc
ctgccgcccggccgtcggaccgaggaggaccggtga
DBGET
integrated database retrieval system
