Nocardioides marmotae: HPC71_09020
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Entry
HPC71_09020 CDS
T09088
Name
(GenBank) ATP-dependent DNA ligase
Organism
nmar
Nocardioides marmotae
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QKE01194
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Position
complement(1866801..1868348)
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AA seq
515 aa
AA seq
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MLLADVVATSRAVAATRSRKAKVSAVAELLGRLDDAGPDEVATVVSYLAGSLRQRRTGLG
WRSLATLPPPAAEPSLTVTGVHEDFDAIAALAGPGSQAARAAAVEALFARATPAEQAWLR
GLVTGEVRQGALDALVQEAVAVAGDVPLAAVRRAAMLAGSTVAVATAALTGGAEALAAYG
LEVGRPVLPMLASSAPSTAEAMAKAGGGEVALDTKLDGIRIQVHRDGDDVLVATRSLDDI
TARLPEVVAIARSLPAERFVLDGEAIALDADGRPRPFQETASRTAQASDGRVAVTPYFFD
LLHLDGRDLLDSPGAERLAELERLVPEAHRVDRLVTADADAADAFVARVLAAGHEGVVVK
NLAAPYDAGRRGAAWVKVKPVLTLDLVVLAVEWGSGRRHGKLSNIHLGARDPESGGFVML
GKTFKGMTDEMLAWQTERFLSLATSRDPYAVQVRPEQVVEVAIDGVQRSTRYPGGVALRF
ARVVRYRDDKLPVDVDTIDSVRSLLTGTTTTEEDA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctcgccgacgtcgtggccacctcccgggccgtcgccgccacccggtcccgcaag
gccaaggtgagcgcggtggccgagctgctcggccggctcgacgacgccggccccgacgag
gtcgccacggtggtctcctacctcgccggctcgctgcgccagcggcgcaccgggctcggg
tggcgttcgctggccacgctgcccccgcccgcggccgagccgtcgctgaccgtcaccggc
gtgcacgaggacttcgacgcgatcgccgcgctggccggcccggggtcgcaggccgcccgg
gcggcggccgtcgaggcgctcttcgcccgcgcgacccccgccgagcaggcctggctgcgc
gggctggtcaccggcgaggtccgccagggcgcgctcgacgcgctggtccaggaggcggtc
gcggtcgccggcgacgtacccctcgcggcggtgcggcgggccgcgatgctcgccggctcg
accgtcgcggtggcgaccgcggcgctgaccggcggcgcggaggccctggcggcgtacggg
ctggaggtgggccgtccggtcctgccgatgctcgcctcctcggcgccgtccaccgccgag
gcgatggccaaggccggcggcggcgaggtcgccctcgacaccaagctcgacggcatccgg
atccaggtccaccgcgacggcgacgacgtgctcgtcgcgacccgctccctcgacgacatc
accgcccggctgcccgaggtggtcgcgatcgcccgctcgctgcccgccgagcggttcgtg
ctcgacggcgaggcgatcgcgctggacgccgacggccggccgcggcccttccaggagacc
gcgtcccgcaccgcccaggcctccgacggccgggtcgcggtgacgccgtacttcttcgac
ctgctgcacctcgacggtcgcgacctgctcgactcccccggcgccgagcggctcgccgag
ctcgagcggctcgtccccgaggcccaccgggtcgaccggctggtcaccgccgacgccgac
gccgccgacgcgttcgtcgcccgggtgctcgccgccggccacgagggggtcgtggtcaag
aacctcgccgcgccgtacgacgccggccgccgcggcgccgcgtgggtcaaggtcaagccg
gtgctcaccctcgacctggtcgtgctggccgtcgagtggggctcgggccgccgccacggc
aagctctccaacatccacctcggcgcccgggatcccgagtcgggcggcttcgtgatgctg
ggcaagacgttcaagggcatgaccgacgagatgctcgcctggcagaccgagcggttcctc
tccctggccacctcgcgcgacccctacgccgtgcaggtgcggcccgagcaggtcgtcgag
gtcgccatcgacggggtgcagcgctcgacccgctaccccggcggcgtggccctgcggttc
gcccgcgtggtccgctaccgcgacgacaagctgcccgtcgacgtcgacaccatcgacagc
gtgcgatcgctgctgaccggcaccaccaccaccgaggaggacgcgtga
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