Neisseria meningitidis MC58 (serogroup B): NMB1233
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Entry
NMB1233 CDS
T00027
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nme
Neisseria meningitidis MC58 (serogroup B)
Pathway
nme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NMB1233 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nme03400
]
NMB1233 (recD)
Enzymes [BR:
nme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NMB1233 (recD)
DNA repair and recombination proteins [BR:
nme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NMB1233 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
SLFN-g3_helicase
T2SSE
AAA_28
nSTAND3
AAA_5
AAA_16
UvrD_C
SRP54
NTPase_1
DEAD
AAA
TrwB_AAD_bind
AAA_24
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAF41614
UniProt:
Q9JZ93
LinkDB
All DBs
Position
complement(1239271..1241016)
Genome browser
AA seq
581 aa
AA seq
DB search
MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQNGHSFIRLSGGEADALS
ALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAAGTSAPDAAGARQNLAKWF
QGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLALICGEDENLPNIALAAPTGK
AAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLLKLRPPKMQAAFNPVYPLPFDVL
VIDEASMLDTALMLQLLKAVKTGARVILLGDENQLPSVGIGAVLSVLSQKTVLDGETHQR
LAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGDNSGIGCLARAAVSGDEGAWALFDRFP
DELEHSECSPNARVERLYRAHKAYWQAVKDGNIEAAYAGISDIVVLAAWRQDAEDFNEAY
CRHVRRKMNIPEHLAYFAGEPIMIRQNDYALELFNGDIGLIMEDVGRQGSLAAYFADADG
FKKVAVSCLPEFEPAFAMTVHKSQGSEYREVWLLPPSAAPSDEGDDALSGLSKELLYTAI
TRAREKFVFFGGEEAFRQAAATVKTRQTALGSMLERVFSQE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcagacagatgaatttgcccaagcggcggcaagggcggcaatccgttttttg
gaacactatgcgggttccggcgacgaagtgcttgcaaactgcaccgaacgcctgtttcag
gcattgcaaaacggtcattcgtttatccgtttgagcggtggcgaggctgacgcgctgtcg
gcactcgcacccgttgtcggaacatccgccgcgcctttgattttggaaggcagaaggctg
tttttgggcaggatgtggcagttggaatacgatttggctgccgagataaaacgcttggcg
gcagccggcacatccgcccccgacgcggcaggcgcgaggcaaaacctcgcaaaatggttt
caaggcacgggcagcgaagggcagcgcgatgccgccgccttggcactgttgcagtctttt
atggtgattaccggcgggccgggaacgggcaaaacgacaacggttgccaaactgctggcg
ctgatttgcggtgaagacgaaaatcttcccaacatcgcgcttgccgcaccgacgggcaaa
gcggcggcacatatggcgcgcgcgctgcaccgtgcaatcaacggttttgacgcgccggag
gccgtccgccgccatttgctcaaactggaagggcaaaccgtccaccgactgctgaagctg
cgcccgcccaaaatgcaggcggcgttcaaccctgtttacccgctgccgtttgacgtattg
gttatcgatgaagcctctatgctggatacggcattgatgctgcaacttttaaaagcggtc
aaaaccggcgcgcgcgtgattctgctgggggatgaaaaccagctcccgtccgtcggaata
ggggcggtgctgtccgttttgtcacaaaaaaccgttttggacggagaaacgcaccaaagg
ctggccggcttccttccggaacacggtttcagcgtcagcgcaaatccacccgtgttggcg
caaaacaccgcccatctgtcgttcagccaccgcttcggcgacaacagcggcatcggctgc
cttgcccgtgccgccgtatcgggcgatgaaggggcgtgggcattgtttgaccggtttccg
gacgaactggaacattcggaatgcagtccgaacgctcgagtcgaaaggttgtaccgggca
cacaaagcctattggcaggcggtaaaagacggcaatatcgaagccgcatacgcgggcatt
tcggatatcgtggttctggcagcttggcggcaggatgcggaagacttcaacgaagcctat
tgccgccatgtacgccgcaaaatgaacataccggaacatttggcatattttgccggagag
ccgattatgatcaggcagaacgactacgcgcttgaactgttcaacggcgacatcggactg
attatggaagatgtcggacggcagggcagccttgccgcctattttgccgatgcggacgga
tttaaaaaggtagcggtaagctgcctgcccgaatttgaacccgcattcgccatgaccgtc
cacaaaagccaaggttcggaataccgggaagtatggctgctgccgccttccgccgcacct
tcggacgaaggggacgatgcattgtccggattgagtaaggagctgttatataccgccatt
acccgcgcgagagagaagttcgtattcttcggcggggaagaagccttccggcaagctgcc
gccaccgtcaaaacgcgtcagacggcattgggcagtatgctcgagcgggtattttcacaa
gaataa
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