Nomia melanderi (Alkali bee): 116424204
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Entry
116424204 CDS
T07404
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nmea01002
]
116424204
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmea04121
]
116424204
Enzymes [BR:
nmea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116424204
Peptidases and inhibitors [BR:
nmea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116424204
Ubiquitin system [BR:
nmea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116424204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
116424204
NCBI-ProteinID:
XP_031826142
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MDLIIHSCPIVFHLSFETVHKNDPYILLSTTRVKDLYDHIEENYQVQPDSFKLFLLATGK
VIDLSEMKDKLMADVGVVFSNEEDLLKYKYALLVMRPTDTLTKMELEYNASSNNLGGMPL
RHSIILEEDNNTDYKSYIKPETGYVGLVNQAMTCYLNSLLQALYMTPEFRNALYNWEYTS
GSDTDEARSIPYQLQNLFLNLQTSTKSAVETTALTKSFGWDSTEAWQQHDIQELCRVMFE
ALEQKFKNTEQADLINRFYEGKMIDYVKCLECGTEKSREDTFLDIPLPVRPFGSNVAYNS
VEEALRAFVQYETLEGSNQYHCEKCNKKCNAHKGLKFTKFPYLLTLHLKRFDFDFNTFHR
IKLNDKVTFPNILNLNHFVSSTTDQESSNSEENTNLAKCDDSSTTDSGTLDNDYTSCENS
LPNSNHSRTTDPDDDDEGVDVLSNGPSTSTSTEHNHENEKNHSSNATKGPYNYELFSIMI
HSGSASGGHYYAYIKDFRTQEWLCFNDQNVTQITNDDIQKTYGGGPTRSYYSGACSSTNA
YMLMYRQIDPARNTLPMQVHDFPSHIQKLLKKIKEKEENKEKMKENEDNDRIFVSSRDHD
RNDRDEDNDRIFVSNDHDRNDRDEDSDRRGDRVVIHTNRGRYYKRIAREYLPPSLCRDFM
LDPTSENKCMIKVLVGCLHPSEIRMNWLTIDFSYDITWAEATKLCWWKFNLDGVVNLDQC
RLVRYDAFLNLILCRYEGMEERTFEDVWKTEGYTLLLEIRDANQMFEENEQNVITSKVYV
LDVTEKKITEDPLLVRALRSLTVKEYKTIVAMLVGMNSSEMTVILGEPGSRLKLMDYDDN
AELSSVNFTDRMDVFVSSVCNDEWKSFVETTTSCEIITNYANRANIITVRLKLPDFNELY
LKELYAPTLEKRCKDTEKPIAESPSKPNVNDLHNSVTSKSSEALKIEKSNEDVSKNASPQ
LEEGEKWNTPEQSNSEDSSLSDSDKTLVGDALEYNDFHVMYYRPISTNNEPDNEYYFKVT
PYEAHSSKFLKVEADKKMKYRTFIKKLEPYIGVPSEYFKIFYRNEDLGEFMYFQIQKHLL
FYNEDEYLKVKVGRFFDFRIKVYMFLPQMDNLFKFLGEWFFHMDMTVADVKRDILADIKE
KHDMDIPFDRCRLREKHLTLATKVYLDDQKLEDLMLYRKSEMAIQELLDKDPVTNSSQII
VCVKNVNKLYEPCAEIVMDGKSIAEMRKKLSALTNIPEKHIEIAKLEDDTSLMFTPLTLH
MKSMWHRQESDVEFDIEYGSLFLYRDNRYRRDLLPKLTSRDESNEVTIQDVSNVKFISSL
NKFKQPYTRRKEKALRIHLTGTE
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggatcttataattcattcatgtccaattgtgtttcatctatcttttgagacagtacat
aagaacgacccatacatcctactttcaaccaccagggttaaagatctttatgatcacatt
gaggaaaattatcaagtacaacctgacagctttaagttgtttctactagcaactggaaaa
gtgattgatttatctgaaatgaaagataaacttatggcagatgttggtgtagttttttct
aatgaagaagacttattaaaatataaatatgcactcttagttatgaggccaacagatact
ttgacaaaaatggaactcgaatataatgcatcatctaataatttaggagggatgcctctt
cgtcattcaataatactggaagaagataataatactgattataaaagttatattaaaccc
gaaacaggttatgtaggtttggtaaatcaagcaatgacatgttatttaaatagtttgctt
caagcattatacatgactcctgaatttcgaaatgcattgtacaattgggaatatacaagt
ggatcggatacagatgaagctagaagtattccatatcagttacaaaacttatttttaaac
ttgcagacatcaacaaaatcagctgtggaaactacagcgttaacaaaaagttttggttgg
gattctactgaagcttggcaacagcatgacattcaagaattgtgcagagtaatgttcgaa
gcattagaacagaaatttaaaaacacagaacaagctgatttaatcaacaggttttatgaa
ggaaagatgattgattatgttaaatgtttggaatgtggaactgagaagtctagagaagat
acttttcttgatataccattaccagtaagaccatttggtagtaatgtggcatacaatagt
gtggaagaagccttaagagcatttgtacaatatgaaacattagaaggaagtaatcagtat
cattgtgaaaaatgcaataaaaaatgtaatgcgcataaaggattaaaatttacaaaattt
ccatatcttttaacattacatcttaaaagatttgattttgactttaatacttttcacaga
attaaacttaatgataaagtcacttttccaaatatattaaatttaaatcacttcgtatca
tctacaacagatcaggaatcttcgaatagcgaggagaacacaaatttagcgaaatgtgat
gatagttcaacaacagatagtggaacgttagataatgattatacttcatgcgaaaatagt
cttcctaacagtaatcattcgagaactactgatccagatgatgatgatgaaggagtagat
gttctaagtaatggaccatcaacatcaacttctactgaacataatcatgaaaatgaaaaa
aatcatagtagtaatgctacaaaaggtccttataattatgaattgttttcaattatgata
catagtggtagtgctagtggtggtcattactatgcatatataaaagactttagaactcaa
gaatggctgtgcttcaatgatcaaaacgtgactcagataacgaatgatgatattcaaaaa
acatatggcggcggcccaactagatcgtactacagtggagcatgtagcagcactaatgca
tatatgcttatgtatagacaaattgaccccgctcgcaatactttgcctatgcaagtgcac
gattttccaagccacatacagaaattattaaaaaagataaaagaaaaagaggagaataaa
gaaaagatgaaagaaaacgaagataatgatagaatcttcgtctcttctagagatcatgat
agaaatgatagagacgaggataacgatagaatctttgtttctaatgatcatgatagaaat
gatagagacgaagatagcgacagaagaggcgatagagtggtaatacatacaaacaggggt
agatattataaacgaattgcacgtgaatacctaccaccttcattgtgtcgcgattttatg
ctcgatccaacgtcagaaaataaatgcatgattaaagtgctagttggttgtctacatcca
tcagaaattagaatgaactggcttacgatagacttctcatatgacataacttgggcggaa
gctacaaagctatgttggtggaagtttaatttggacggagtagtaaatctcgatcaatgt
cgtttagttcgttacgatgcctttttgaatttaattttgtgtcgctatgagggaatggaa
gagagaacttttgaagacgtctggaaaacagagggatatactttactgttagaaatacgc
gacgcaaatcagatgttcgaagagaatgagcaaaatgtaattacatcaaaagtgtacgtc
cttgacgttaccgagaagaaaatcacagaagacccattgcttgtgcgagccttacgttct
ctgactgtcaaagaatataaaacaatagtagctatgttagtcggtatgaactctagtgaa
atgacggtaatactaggagaaccaggaagtcgcttaaaactcatggactatgacgacaat
gctgaattaagtagtgtcaacttcactgataggatggatgtgtttgtatcatctgtatgt
aacgatgaatggaaatcgtttgtcgaaactacaacttcatgtgaaattataacaaattat
gcaaatcgtgcaaatattattacagtgcgcttgaaacttcctgatttcaatgaactttat
ttgaaagaattgtatgccccaacattagaaaagagatgtaaagacacggaaaaacctatt
gctgaaagtccttcaaaaccaaatgtcaatgacttgcataatagtgttacatccaagtcc
agtgaggctctaaaaattgagaaaagtaacgaggatgtgtcaaagaatgcgagcccacag
ttagaagaaggcgaaaaatggaatacaccagaacagagtaatagtgaggatagtagtctc
agtgacagtgataaaacattggtcggagacgctcttgaatataatgattttcatgtaatg
tactaccgtccaatcagtacgaataatgaacctgataatgaatattactttaaagttacg
ccctacgaggctcacagtagtaaatttctaaaagtagaagcagataagaagatgaagtac
agaacgtttattaaaaaactggagccatatatcggtgtaccgtcggagtactttaaaatt
ttctataggaacgaggatttaggagaattcatgtattttcaaatacaaaaacatttactt
ttctataatgaagacgagtaccttaaggtcaaggttggacgtttctttgattttagaata
aaagtatacatgttccttcctcagatggataacctattcaaatttttgggtgagtggttc
tttcacatggacatgactgttgccgacgtaaagagagacatcttggcagatattaaggaa
aaacatgatatggatataccgttcgacagatgtcgcctgagggaaaagcatcttacgtta
gcaacaaaagtatacttagatgatcaaaaacttgaagatttaatgttgtatcgaaaatct
gagatggccatacaagagttacttgataaggacccagttactaacagtagtcaaattata
gtatgcgttaaaaatgtgaataaattgtatgaaccgtgcgcagaaatagtcatggacgga
aagtctatagcggaaatgaggaaaaagttatctgcattaacgaatatacctgagaaacac
attgaaatagcaaaactagaagatgatacgtcactaatgttcacacctttgactcttcat
atgaaatcaatgtggcatagacaagagtcagacgttgaatttgacatcgaatatggttct
ctgtttttgtatagagataacaggtatagaagagatcttctgccaaaactgacgagtcga
gatgagtccaatgaagttacaattcaagatgtgtctaacgtgaaatttatttcaagttta
aacaagtttaaacagccgtatactcgccgaaaagagaaagcgcttagaatacatttaacc
ggcaccgaatga
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integrated database retrieval system
