Nomia melanderi (Alkali bee): 116427237 Help Entry 116427237         CDS       T07404                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism nmea  Nomia melanderi (Alkali bee) Pathway nmea04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:nmea00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116427237  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nmea00536]     116427237 Glycosaminoglycan binding proteins [BR:nmea00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116427237 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  116427237 NCBI-ProteinID:  XP_031833209 LinkDB All DBs Position Unknown AA seq 1505 aa AA seqDB search MGRKALQLATTFVVFQVLLLQVHCIRTKLRKQRSRPVQAQQPANGNYDYDYYESYDEYED RNETVPMPSLITTPANTDSTDRDESSAEGLRSVYGSASPTDLPTPTTTRFFHPELSDVIS ATSERDNPPPTEIVPGESNVVNSVAMPGPRGEPGRPGDIGRPGDAGFPGQPGTPGVPGPP GPPGSVPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAYLQTQVGPVGPRGPAGPPGPS GPQGFQGVRGEPGEPGPVGPPGAPGPRGLPGLSGKDGNTGEDGEPGPPGSAGPVGPRGLP GMPGLPGAKGHRGFPGLDGAKGEQGVSGEKGSLGAPGPMGPMGPTGPAGPRGERGREGPS GPPGIRGVDGIPGPPGQPGAVGKSGPPGYPGSPGMKGDQGAQGPKGSQGLQGPRGETGRP GQPGESGPQGPQGKDGIPGDKGSVGSPGLVGTPGFPGARGQPGIPGNPGTPGMKGMPGLS GERGFKGDSGSKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPSGASGPPGERGSPGAPGLS GPDGPMGPKGQSGDRGMSGLPGPKGSTGDPGRPGPAGLQGTRGIMGRPGAPGKPGNPGDR GIQGADGRPGEQGPTGIQGLPGPIGLPGEKGYPGEAGKAGEPGNPGPPGPRGDTGKEGAP GPQGSPGPSGADGERGPPGVPGARGFQGFPGAIGNPGTPGKDGEPGVQGPPGLIGIPGNR GERGFPGERGQAGVPGPVGPKGERGSQGLDGPPGSPGEKGDRGTPGPSGLLGLPGLRGVP GESGPKGERGSIGPSGPEGPSGRIGERGPQGLVGPPGPPGEPAERGDPGLPGSPGEVGAP GSPGERGPQGLQGSQGFPGPQGLVGLPGLKGDRGYPGLKGDQGNSGLPGTPGEMGPPGLI GLTGAKGVRGEPGLRGEPGIMGPPGIPGVVGAAGPPGAVGPLGPPGLPGNKGTAGETGRP GSPGPIGIPGLPGADGNKGESGSQGPPGSPGPQGPQGTPGERGTPGLPGPSGPVGARGLR GATGESGIPGKPGAEGPPGPPGLIGPIGPAGPPGEIGVEGPTGKPGPPGISGRPGDKGPP GIVGPQGLPGPAGLPGPPGQAGPPGAVGERGSKGEAGPQGVEGQQGPRGKPGPIGLEGPK GDRGEEGLKGAKGHRGFTGLQGLPGSVGPPGEKGIPGPPGLPGKDGEPGIRGSPGRDGSP GPIGLTGNPGSKGPSGDEGRHGLPGPPGPPGPPGPPGELGLGYDAASLAALLGQGQTKGP DPLIGDEPPRIFTQEMSEEERREFILKAYKQLTLSFKKYIKPDGDKNSPAKTCRDLYVAY PDKPSGEYWIDPNEGDSRDAILVYCDAKKRATCLLPNPVRSPEMKYITDQQETWLSEIEN GMKITYKSDSNQVGFLQLLSKNAYQNITYNCKNSVAYFDSERKTYRKGMKLLTWNDVELT PRGNQRLRYEMIKDECQLRGAEWGKTIISYETDKPVRLPIIDIALRDIGKPDQSFYIEIG AVCYE NT seq 4518 nt NT seq  +upstreamnt  +downstreamnt atggggcggaaggcccttcaactggccacgactttcgtcgtgttccaggttctcctgctg caagtacactgtatcaggaccaaactgagaaaacaacggtccaggccggtgcaagctcaa caacctgcgaacgggaattacgattacgattattacgagagttacgatgagtatgaagac aggaacgaaacggtaccaatgccttcactcataactaccccagctaacactgatagtaca gatagagacgagtcatccgcggagggattgcgatccgtctatggatcagcatctcccacc gatctaccaaccccaacaacaactcgattttttcatccagaattgtctgatgtcataagt gcaacttcagaaagagataatccgccaccgacggaaatcgtgcctggtgaaagtaatgta gtaaattcggttgccatgcctggaccgaggggtgaacctggtcgaccaggtgacattggc cgtccaggcgatgctggatttcctggacaaccagggacaccaggagtgccaggacctccg ggaccaccaggctccgtacctgatgtatcgatgtactatcaacaattggctttgtcccaa gcaaatcaagataaaggtccaacaggagctgcagcaccgctgtatggtccagaagcttat ctacaaactcaagttggtcccgtcggtccccgtggtccagcgggcccgccgggtccatct ggaccacaaggctttcaaggtgtacgtggtgaacctggagaacctggacctgtcggtcct ccaggtgcaccaggtcctcgaggattacctggcttgtctggaaaagatggcaatactggt gaagacggagaaccgggtcccccgggatcagctggcccagttggtccgagaggtctccca gggatgcctggacttcctggagctaaaggacatcgtggatttcctggactagacggagca aaaggagaacagggtgtgtcaggagaaaagggatctctaggtgcacctggtcctatgggt ccgatgggtccaacgggtcccgcgggtccacgtggtgaacgaggcagagaaggcccatca ggaccaccaggaattagaggagtagacggaattcctgggcctcctggacaacctggtgcg gtaggtaagtcaggtccacccggttatccaggtagtcctggtatgaaaggagatcaagga gctcaaggaccgaaaggaagtcaagggttacaaggcccgcgaggggaaaccggtcgtcca ggacagcctggcgaatcaggaccacaagggccacaggggaaagatggtatacctggagat aaaggaagtgttggatcgcctggtttggtcggcacgccaggtttcccgggagctcgagga caaccaggaatacctggcaatcctggtacgcctggaatgaaaggaatgccgggactttcg ggtgaaagaggattcaagggtgacagtggatctaaaggtgattcaggtacaccagggcca cgtggtttgcctggtcctcctggaaacgaaggaaaaagagggaaacgaggaatgcgtggt ccaagtggtgcatcgggtccccctggagaacgtggcagtcctggagcacctggcctttct ggaccagatggacctatgggacctaaaggtcaatctggagatcgcgggatgtctggttta ccaggacctaaaggtagtacaggagatcccggtcgtccgggaccagccggattacaggga actcgtgggatcatgggccgtcctggtgccccagggaagcctgggaatccaggggataga ggaattcaaggtgctgatggaagacctggtgaacaaggcccaactggtatacaaggttta cctggaccaataggtctgccaggagagaaaggatacccgggtgaagcaggcaaagccgga gaaccaggaaatcctggaccacctggtcctagaggcgatacaggaaaggaaggagcacct ggtccacaaggttcacctggtccatcaggagcagatggtgaacgaggtcctcctggtgta cctggtgctagaggtttccagggttttccaggtgcgattggtaacccaggtacaccaggc aaggatggagaaccgggtgtacaaggaccgccaggtctaattggtatacctggtaacaga ggtgagcgcggatttccgggggaaagagggcaagcaggtgtgccaggacctgtaggacca aaaggtgaacgaggatcacaaggacttgatggacctcctggatcaccaggtgaaaaggga gatagaggaacccctggtccgtctggacttttaggtttgccgggattgcggggcgttcct ggagaatcaggcccaaaaggagaaagaggatccattggcccatccggtcccgagggacca tcaggacgcattggagaacgtggaccacaaggtttagttggcccaccaggccccccaggt gaaccagctgaacgaggagatcctggtttacctggttctccaggagaagttggagctcct ggtagcccaggggaaagaggaccacaaggtttgcaaggatctcaaggatttccaggacca caaggacttgttggtttaccgggattaaaaggtgatcgaggttatccgggtttaaaagga gatcaaggaaattcaggtcttccaggaactcctggtgaaatgggaccacccggcttaatt ggactgacgggagctaaaggagtgagaggtgaaccaggtcttcgaggagaacctggcatt atgggaccacctgggataccaggagtagttggagcagctggaccaccaggtgcagttgga ccactaggtcctcctggactaccaggtaataagggtactgctggagaaacaggacgacct ggaagtcctggtccaattggaatccccggtttacccggagcagacggaaacaaaggcgaa agtggatctcaaggaccaccaggttcacctggacctcaaggacctcaaggtacacctggt gaaagaggtacaccaggattaccaggaccttctggaccagtaggtgctagaggattacga ggtgcaactggtgaatctggaatacccggaaaaccaggagcagaaggtccaccaggacct cctggtttaataggaccaatcggcccagcaggacctcccggagaaattggagtagaagga cctactggtaaaccaggacctcctggaatatctggtcgtcctggagataaaggaccacct ggaattgttggaccacagggattacctggtcctgcaggtttaccgggacctcctggccaa gcaggaccaccaggggcagttggagaaagaggttcaaaaggagaagctggtccgcagggt gtagaaggacaacaaggacctagaggaaaacctggacctataggattagaaggtccgaaa ggtgatcgcggagaggaaggcttgaaaggtgccaaaggacatagagggtttacaggtttg caaggtttacctggatccgttggtccaccaggagagaaaggtattcccggaccacctgga ctacctggtaaagatggagaacctggaatcaggggtagtcctggtagagatggtagtcct ggaccaattggattaacgggtaatcctggatcaaagggaccttctggtgatgaaggtcgt catggactaccaggtccgcctggtcctccaggacctccaggtccacctggtgaacttgga ttagggtacgatgctgcttcgttagctgcacttttagggcaaggtcaaactaaaggtccg gacccactgattggtgatgaacctcctaggatatttactcaagaaatgtcagaagaagaa agacgagaatttatattaaaagcatacaaacaattgaccttatctttcaaaaaatatata aaaccagatggtgacaaaaattcgcctgcgaaaacatgtagggacctttacgttgcttat cccgacaagccttctggagagtattggatagatccaaatgaaggtgattctagggatgct attttagtatattgtgatgctaaaaaacgtgcgacatgcttgttaccaaatccagtacgt tcaccagaaatgaaatacattactgatcaacaagaaacttggttaagtgaaattgagaat ggaatgaagattacttataaatcagatagcaatcaagttggcttcctacaattgttatca aagaacgcttatcaaaatataacatataattgtaaaaatagtgtggcatattttgattct gaaagaaaaacatacagaaaaggtatgaaactattgacatggaatgatgttgaattaaca ccacgtggaaatcaacgtcttagatatgaaatgataaaagatgagtgtcagttacgtggt gcagaatggggcaaaactataatctcatatgaaactgacaaacctgtaagattgcctata atagatattgctctacgagacattggaaaaccagatcaaagtttttacatagaaattggc gctgtttgttatgaataa

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