Nomia melanderi (Alkali bee): 116428530
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Entry
116428530 CDS
T07404
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03022
Basal transcription factors
nmea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116428530
09124 Replication and repair
03420 Nucleotide excision repair
116428530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116428530
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116428530
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116428530
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116428530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
116428530
NCBI-ProteinID:
XP_031836112
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPTGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVSILNELNVWKEVSIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQMETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITATQIVGYLQQHAHSKMIEAGPPVLPPTIVDQIKLWENERNRFVFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQSDRKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacaataactggaaagaatttactacgacccaccggattacaatgtaaaaat
cttcaagagtatttaaaatcacgacctccagaagtgttgaataaactctatcacaatcct
ccaatttgtttggctgtatttcgtgaattgcctgtgatagctaagcactatgttatgcga
ttgttatttgtcgaacaaccggtacctcaagcagtcattgcttcttggtgttctaaactt
cattttgaagagcatcaaaaggtagtttcgatattgaatgaactgaatgtgtggaaagaa
gtttccataccaggaggattacctggatggattctaaatactacatttaagaaaaattta
aaaattgttttactgggaggcggtaaaccatggaccatgtcaaatcaaatggaaactgat
agtaaaccaagagatgttgcgtttttagattcgtatgcattagaaagatgggaatgtgtt
ttgcattatatggttggatcacagcagcaagaaggtatatcagctgacgctgttagaatt
cttttacatgctggtttaatgaaacgagatgaagctgatggaagtcccgttattactcaa
gctggatttcagtttttgttattagaaactgcatcgcaggtgtggtacttcattttacaa
tatttagacacgatagaagcgagaggccttgatttggttgaatgcctgacatttctcttt
caattaaatttttcaacacttggcaaagattatagtactgaaggaatgtctgagggttta
ctaacatttctacaacacctacgggaatttggcttggtatatcaaagaaaacgaaaagct
ggaagattttatcctacacgactagcattaaatattgccactggacaaaacaagccacta
tccagagatccagaaaaagagggttatatcgttgttgaaacaaattacagagtatatgct
tacacaaattcaaatttacaagttgccttacttggtctattttgtgaaatgttatatagg
tttccaaatttagttgtatcaatattaacaagagattctgtacgtcaagctttaaaaagt
ggtattacagcaactcagattgtaggttatttgcagcaacatgctcatagtaagatgata
gaggcaggtcctccagttttacctcctacaattgtagatcaaattaaattatgggaaaat
gagaggaatagatttgtatttagcgaaggagttttatacagtcagtttctctctcaaact
gactttgaagtactcagagatcatgccctttctaccggagtattaatttggcaaagtgac
agaaaacgaacgatggtagtcacaaaagcaggccatgatgatgtaaaaaaattttggaaa
cgatattccaaaggctccagttag
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