Nomia melanderi (Alkali bee): 116430488
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Entry
116430488 CDS
T07404
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03022
Basal transcription factors
nmea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116430488
09124 Replication and repair
03420 Nucleotide excision repair
116430488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116430488
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116430488
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116430488
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116430488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
zf-RING_4
IBR
Motif
Other DBs
NCBI-GeneID:
116430488
NCBI-ProteinID:
XP_031840577
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADDEEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLDRKVGARLGMMR
HLYIILDASESMSNQDLKPTRFLCCLKLLEHFIDEFFYQNPISQLGVILTRNKRAEKISD
LAGNSKKHIKELKALQQIQPAGEPSLQNSLELALKSLRLLPSHASKEVLVIIGALTTCDP
GDINETIQNMKTDCIRCSVIGLAAELYICKRMATATGGEHGVALDDKHFKEQLNMHIDPP
PAATRLDAALVKMGFPHHALQSSATDTSMAVCMCHAVSADETVKLTSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVEPFKEVGYEGTPSICYGCQKTLSQKDKKIYI
CGKCTQTFCIDCEIFIHESLHTCPGCATNPETYQRSTERT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgaagaggagaaggaatatcggtgggagactggttatgaaaaaacatgg
gaagcaattaaagaagatgatcatggacttttggaagcctcggttgcagatattattcat
aatgctaaaaggaagcgtcagttggacaggaaggttggtgccagattaggtatgatgagg
catctttatataattcttgatgcttctgaatcaatgtctaatcaagatctgaagccaact
cgtttcttatgttgcttaaagctcctagaacattttatcgatgaattcttttatcaaaat
cctataagtcagttaggagtaattcttacaagaaataaaagagcagagaaaattagtgat
ttagctgggaactctaaaaagcatattaaggaattaaaagctctgcaacaaattcaacca
gcaggtgaaccatcgttacagaattccttagaattagctttaaaatctttacggcttcta
ccatcgcatgctagtaaagaagtattagtaattataggagctcttacaacatgtgaccca
ggagatataaatgaaacgatacaaaacatgaaaacagattgtataagatgtagcgtaata
ggattagctgctgaattatatatttgcaaaagaatggctacggcaactggtggagaacat
ggtgttgcattagacgataaacactttaaagagcagttgaacatgcatatagatccacca
ccagctgcaaccagattggatgctgctcttgttaaaatgggttttcctcatcacgcttta
cagtcttctgcaactgatacatccatggcagtatgcatgtgtcatgcagtaagcgcagat
gaaactgtaaaacttacgagtacaggatatctgtgtccacagtgccttagtaaacattgt
gaacttcctgtagaatgtagagcctgtggactcactttagtgtctgctccacatttagct
cgatcttaccattatttattccctgttgagccatttaaagaagtaggatacgaaggaact
ccttcgatttgttatggttgccaaaaaactttatcccaaaaagataaaaagatatacatt
tgcggcaaatgtacccaaacattttgtatagactgtgagatatttattcacgaatcttta
cacacgtgtccaggctgtgcaacaaatccagaaacatatcaaagatccacggaaagaact
taa
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