Numida meleagris (helmeted guineafowl): 110393618
Help
Entry
110393618 CDS
T06015
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
nmel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110393618 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
110393618 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110393618 (THOC1)
03041 Spliceosome [BR:
nmel03041
]
110393618 (THOC1)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110393618 (THOC1)
Spliceosome [BR:
nmel03041
]
Complex C
Other components
EJC/TREX
110393618 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110393618 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
110393618
NCBI-ProteinID:
XP_021242327
LinkDB
All DBs
Position
2:100756845..100783060
Genome browser
AA seq
679 aa
AA seq
DB search
MASSARVVERRSAGAMSPPLFSLPEARHRFTISTREALHHKTLKPLLNAFNQIPGSENEK
KCTLDQAFRVIVEEEIINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLD
QCDKIFTFVEKNVATWKSNMFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLF
PLSEKSGLNLQSQFNLENVTVFNTNEHESTLGQKHSEERDEGMDVEEGEMGDDEAPTSCS
IPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLE
ELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTD
EQSLWIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSQPE
FQLGPPDSKPMRPARKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREY
MPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLP
EYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPESQRDKPLTGEQMEAFA
IRLGEHWRALAPYLEMKDSDIRQIEADSEDVKMRAKQLLVAWQDQEGAHATPEHLIAALS
KAGLGDLAESLTNDTDSGS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagcgcgcgtcgtggagcgccgctcggccggagcgatgtcgccgccgctt
ttcagcctgcccgaggcgcggcaccgcttcacgatctccaccagagaagctctgcaccac
aaaaccctcaaaccgctgttgaacgcctttaatcagattcccgggagtgaaaatgaaaag
aagtgtaccctggatcaagctttcagagttattgtggaagaggaaataataaacaaagct
ccgtgtgaaaacctgctggcaattatttctcttgctattaatggagtcactgaaggtatc
tgcactgcatcaacaccttttgtgctcctgggagatgttctggattgcttacctttggat
cagtgtgataaaattttcacttttgtggagaagaatgttgctacgtggaaatcaaacatg
ttttattctgcagggaaaaactacttgctacgaatgtgcaatgaccttctaaggagattg
tccaaatcacaaaacacagttttttgtggaagaattcaactgttcttggctaggttgttt
ccgctgtctgaaaagtcaggacttaacttgcagagtcagtttaacctggaaaatgtgact
gttttcaataccaatgaacatgagagcactctagggcagaagcactcagaggagagagat
gaagggatggatgtagaagaaggtgaaatgggagatgatgaagcaccaacaagttgttcc
attccgatagattataacctgtatagaaaattctggtcgcttcaagattactttagaaat
cctgtgcagtgctatgagaaggtctcatggaaaactttccttaagtactcagaagaagtt
ttggctgttttcaaaagttacaaattggatgacacgcaggcttcccgaaagaagctggag
gagctgaaaacaggtggagaacacgtgtactttgccaagttcctgactagtgagaagctg
atggatttgcagctgagtgacagcaacttccgccgtcacatcttgttgcagtatctaata
ctgtttcagtatctgaagggacaggtcaaatttaaaagttcaaactatgttctaacagat
gagcagtctctttggattgaagatactacaaaagcagtttaccagcttctttcagaaaat
cctccagatggggaaagattctcaaaaatggtagagcatatattaaatactgaagaaaac
tggaactcgtggaaaaacgaaggctgcccgagctttgtgaaagaaagatctcagccagag
tttcagcttgggcctcctgattctaagccaatgaggcctgcaagaaagaggccagctcca
gaggacttcttaggaaaaggaccaaacaaaaaaatcctcatggggaatgaggaactgacc
cgactttggaatttatgtcctgataacatggaagcttgtaaatctgagagcagggaatat
atgccaacactggaagaattctttgaagaagccattgaacaagcagatcctgaaaacatg
gttgaaaataagtacaaggctgtgaacaattctaactatggatggagagcgctaagacta
ctggcacgcagaagcccgcatttcttccagccaacaaatcagcagttcaagagcttacca
gaatatctagaaaacatggtaatcaaattagccaaggagttgcctcctccttctgaagaa
ataaaaacaggcgaagatgaagatgaggaagataatgatgctttattaaaggaaaacaat
gaaagtccggagtcgcaacgggacaaacccttgacaggggaacaaatggaggcattcgcc
atcaggctgggggagcactggagggctttggccccctacttggaaatgaaggattccgat
atccgtcagatcgaggcggatagcgaagacgtgaagatgagagccaagcagctgctggtt
gcctggcaggaccaggagggtgcgcacgccacacccgagcacctgatcgccgcgctgagc
aaagcggggctgggggaccttgccgagagcctgaccaacgacaccgacagcggcagctag
DBGET
integrated database retrieval system
