Numida meleagris (helmeted guineafowl): 110398509
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Entry
110398509 CDS
T06015
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nmel01002
]
110398509 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110398509 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmel04147
]
110398509 (USP13)
Enzymes [BR:
nmel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110398509 (USP13)
Peptidases and inhibitors [BR:
nmel01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110398509 (USP13)
Ubiquitin system [BR:
nmel04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110398509 (USP13)
Exosome [BR:
nmel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110398509 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
110398509
NCBI-ProteinID:
XP_021251895
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All DBs
Position
4:6746416..6793419
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AA seq
863 aa
AA seq
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MQRAALFGGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGGALPKRRNAKLFLDLEANG
DLSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIASDALLSAKSPYRKQDPDSWEE
ELQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
ATEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVAENG
LRDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGI
SPQMFKAFISKDHTEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCC
QSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKIPFSAC
LQAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSID
MPDFLDINHLRAMGLQPGEEELPDIAPPIIIPEDPKDRMMNHFVESLDIDESSVMQLAEM
GFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGAASSGVAGLGAVGL
DNQPPEEMVSIIMSMGFQRNLAIQALKATNNNLERALEWIFSHPELEEEDGEPALNMMDL
ENHTNANILAEARSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDL
RVCASERPPKDLGYIYFYHRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctgttcggcggcggcgacgcgcagatggcggccggggacctgggc
gagctgctggtcccctacatgcccaccatccgcgtgcccaagtccggggaccgggtctac
aagacggagtgtgccttctcctacgactctcccgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaacagga
cagtgtgtatatttgcatctgaaacgacatgtgatagagaaggtaccaggggcatctggt
ggtggagctttaccaaaaaggaggaatgctaagctatttttagatttagaggcaaatggt
gatctgagcagtgatgactttgaatatgaagatgaagcaaaactcgttatatttccggat
cactatgaaatctcattaccaaacatagaagagttaccagcactggtgacaatagcttct
gatgcactcctcagtgcaaaatcaccctataggaagcaggaccctgactcatgggaagaa
gagctacaggcatctaaacatgccaaatcgcttgtacagttggacaatggtgttagaatt
ccccccagtggttggaagtgctcaaaatgtgacctgcgggagaatctgtggctaaacctg
acggatggttcagtgttgtgtgggaagtggttcttcgatggtagtggagggaatggccat
gcaacagagcactacaaggagacaggttatcccctggcagtgaagctgggaaccatcact
cctgatggagcagatgtctattcctttgatgaagaggagccggttttagatccgcatata
gcaaagcatctggcacactttgggattgatatgctgcagatgcaagtggcagagaacggt
ctaagagataacgatataaaaccaagagtctctgaatgggaagtgattcaggaagctggt
gtgaaactcaagcccatgtatggcccaggatataccggcatgaagaacctgggaaatagc
tgctacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtat
gtgggaaaccttccgagaatatttgactactccccacttgatccaacacaagatttcaac
actcagatggctaaactgggacatggcctcctttcaggccagtattctaaaccacccatg
aaatctgagcttattgaacaggtgatgaaagaagaacacaagcctcaacacaatggaata
tctccccagatgtttaaggcttttataagtaaagaccacacagaattttcctctaataga
caacaagacgcacaggagtttttcctacatcttataaatctagtagagaggaatcctgta
ggttcagaaaaccccagtgatgtcttccggttcttggtggaagagcgcacacaatgctgc
cagtccagaaaagtccgctacactgagagggtggactacatcatgcagttacctgttgct
atggaggcagcaacaaacaaagatgaattaattgcgtatgagctgaaaaggcgagaagca
gaagctgcaaggagagctccaccagaacttgtccgtgccaagatcccatttagtgcatgt
ttgcaggccttttctgaaccaagcaatgtagaggacttctggagcagtgcccttcaagca
aaatctgcaggagttaagacttctcgttttgcatcgtttcctcagtacttggtggtgcag
ataaagaagttcaccttcggcctcgactggatacccaaaaagcttgatgtttcaatagac
atgccagacttcctagatatcaaccaccttcgagccatgggtctccagccaggagaagag
gaacttccagacattgctcctcccattatcattcctgaagacccaaaagatcgtatgatg
aaccattttgtggagtctctagatattgatgagtcttcggttatgcaactggcagagatg
ggttttcctttggaagcatgtcggaaagccgtgtactatacaggcaacctgggtgctgaa
gtggctttcaactggatcattgcacatatggaagagccagactttgctgagccgttggtt
gtacctgtgtttggaggagctgcttccagtggagtggctggcttaggggctgttggactg
gataatcagcctcctgaagagatggtctccatcatcatgtctatgggcttccaaaggaac
ctagcaattcaagctctgaaggcaacaaacaataacttggagcgtgcactggaatggatc
ttcagccaccctgaacttgaggaggaagatggggagcctgctttgaacatgatggatttg
gagaaccatactaatgcgaatatccttgcagaggcaagatcggagggacccaggatcaaa
gatgggcctggaaggtacgagctgtttgggttcatcagccacatgggaacatccacaatg
agtggtcactatgtttgtcatctcaaaaaagaaggaagatgggtgatctacaatgacctt
agagtctgtgcctcagaacgacctcccaaagacctgggctacatttacttttaccacagg
ataccaagttag
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