Numida meleagris (helmeted guineafowl): 110400651
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Entry
110400651 CDS
T06015
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110400651 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110400651 (TAF5)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110400651 (TAF5)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110400651 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
110400651 (TAF5)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110400651 (TAF5)
STAGA complex
110400651 (TAF5)
TFTC complex
110400651 (TAF5)
SAGA complex
110400651 (TAF5)
SLIK complex
110400651 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
Nup160
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
110400651
NCBI-ProteinID:
XP_021256381
LinkDB
All DBs
Position
5:complement(12097067..12107689)
Genome browser
AA seq
786 aa
AA seq
DB search
MAAVPEEPAEVAAVKPDPDAGTPPQPPAAPPSTAAPPAPSAAAAEGEAAGNAGDAASAKP
AAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDLGAAALSPAGAGLP
GAPGSEGDGSSSEALLNRVTAAAAIAIGGSVPPVASSSPGVAAAAAVPPGKVGGGVVVED
QPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELVYN
QHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSY
QLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFF
GLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKRDSVGSKSKKQDPNAPPQNRIPLPELKD
SDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTV
RVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD
RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWAT
DHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHS
LAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNT
VRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAA
GAYSSQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtacctgaggagccggcggaggtagccgcggtaaagccggacccagacgcg
gggacgccgccgcagccccccgccgctcccccctccaccgccgctccccccgctccctcg
gccgcggcggcggagggggaggcggcggggaacgccggggacgcggcgtccgctaagccc
gcggcaccgggcccggccgcctccccggcggcgctggaccggcagacgctggtggccgtg
ctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcgccgcgaagcc
cgcctgctcggcgaggacctcggagccgccgccctcagccccgccggtgccggactcccg
ggagccccggggtccgagggggatggcagcagcagcgaggcgctgctcaaccgggtcacc
gccgccgccgccatcgcgataggaggcagcgtcccccccgtcgcctcttccagcccgggg
gtggcggcagcggccgcagtgccaccggggaaagttggaggaggcgttgttgtggaggat
cagccagatgtgagtgcagtgttgtctgcctacaatcagcagggggacccaacgctgtat
gaggagtactacagtggtttaaaaaacttcatagagtgttccctggactgtcatcgagcc
gaattgtctcagctgttttatcctctctttgtgcacatgtacttggagttagtctacaat
caacatgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggaatgttat
taccaggatgacctccgtgtgttatctagcttaaccaaaaaagaacatatgaaaggtaat
gagaccatgctggatttccgaacaagcaagtttgttctgcgtatttcccgtgactcctac
cagctactgaagaggcatcttcaggagaagcagaacaaccagatctggaacattgttcag
gaacatctctacattgacatttttgatggaatgcctcgcagcaaacaacagatagatgct
atggttggaagcttggctggggaggcaaaacgagaggcgaataaagcaaaggttttcttt
ggcttattgaaagagccagagtttgatgtgcctttggacgatgaagatgaagaaggagaa
aatgaggaaggaaaaccaaagaagaaaaaacctaaaagagatagtgtagggtcaaaaagt
aaaaaacaagaccctaatgctcctccccaaaacagaattcctcttcctgaactgaaagac
tcagataaactggataaagtaatgaacatgaaggaagctgccagacgtgtacgtcttggg
ccagagtgcctgccttccatctgtttctacacattccttaacgcttatcagggtctaact
gcagtggatattacagatgactctagcatgattgtaggaggctttgctgactctacagtc
agagtgtggtccgtgactccaaaaaagctacgcagtgtgaaagcagcagcagacctcagt
ctaattgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaaccgcaagt
gagttgaagattttatatggtcacagcggacctgtctatggcaccagcttcagtcctgat
aggaactacctgttgtcctgttctgaggatggcactgtcagattgtggagcctccaaaca
ttcacatgtttggtgggatataaaggacacaactatccagtatgggatacgcagttctct
ccttacggatattactttgtgtcaggaggacatgatagagtggctagactgtgggcaaca
gatcattaccagcctttacggatatttgctggccatcttgctgatgtgacgtgcactcga
tttcatcctaactctaactatattgccactggctcagcagacaggactgtacggctctgg
gatgttttaaatgggaattgtgtaagaatattcactggacataagggaccgattcactca
ttggcattttctcctaacggacgattcctggctactggagcaacagatggcagagttctg
ctgtgggatattggacatggcttgatggttggagaactgaaagggcacactgacactatc
tacgcactccgattcagtagagatggggagattttagcatcaggctcaatggataacaca
gttcggctgtgggatgcagtgaaagcatttgaagatttagaaactgatgactttactaca
gccactggacacataaacttgcctgaaaactcacaggacttgttactaggtacatacatg
accaaatcaacgccagttgtacaccttcattttacacgcaggaacttgctgctagctgca
ggagcctacagttcacagtaa
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