Numida meleagris (helmeted guineafowl): 110403182
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Entry
110403182 CDS
T06015
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
nmel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110403182 (UPF3B)
03015 mRNA surveillance pathway
110403182 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110403182 (UPF3B)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110403182 (UPF3B)
mRNA cycle factors
P-body specific factors
110403182 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
110403182
NCBI-ProteinID:
XP_021261823
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All DBs
Position
8:16624750..16632459
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AA seq
481 aa
AA seq
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MKEDKENARPKERRGAPAGPGAALGAGSGVAGGSDGRTGGSAELERLERPKDKKETLSKV
VIRRLPPSLTREQLEEHLQPLPEHDYFEFFANDSSLYPHVFSRAYINFRNQEDIVLFRDR
FDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDEK
LTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEER
RKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLEKKEKSKKLE
KETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQREKLR
RQEEERRRQKERFEKEKVFRRKEEEVKKERDLLRDKGKKSDLTDFTCGTDKSEKVTKDDK
KEDTVKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKAADQGAEKKQESESSNTKEE
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaggcccaaggagcggcgcggggctcccgccgggccg
ggagcggctctgggagccggctcgggggtggcgggcggctcggacgggaggaccggcggc
agcgctgagctcgagcggctggagcggcccaaggacaagaaggagacgctgagcaaggtg
gtgatccggcggctgccgcccagcctcacccgggagcagctggaggaacacctgcagccc
ctgcccgagcacgactacttcgagttcttcgccaacgactccagcctgtacccgcacgtc
ttctcccgggcttacatcaacttcaggaaccaggaggacatcgtgctgttccgagaccgc
ttcgacggctatgtcttcgtggatcacaaaggtcaggaatatgctgccatagtagagttt
gcacctttccagaaagctgcaaaaaagaagagcaagaaaaaggatgccaaaacggggaca
attgaagatgatccagagtacaagaagtttttggaaagttacagtgcagatgatgagaag
ttaacctccactcctgaaactttgttggaggaaatagaggcaagaaacaaggagctgata
gctaaaaagactactcccttactgaacttcttgaagaataagcagaggctcagagaggaa
aagagagaggaaaggaggagaagagaactggaaagaaaaagacaaagagaagaagaaaga
agaaaatggaaggaagaagagagaagaaagagaaaagaagcagaaaaattgaagaaggta
gacagatgtccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagctactt
aagaagcctgaaaaagatgagaaagacttggagaaaaaagaaaaatccaagaaactggaa
aaagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgatggg
gagacaaaagaagagaaggcaaaaaaatcggaagatgagtgtgtaaaggactacagggat
cgagatagagattttgaaagagacagagaatatgagagagcacagagggagaaactgagg
cgccaagaagaagagcgtcggaggcagaaagagcgctttgagaaagaaaaggtttttaga
agaaaagaggaagaggtgaaaaaggagagagacttgctcagagataagggaaagaaaagt
gatcttacagactttacctgcggcacggacaaatctgagaaagtaaccaaagacgacaaa
aaagaggatacagttaagagggatcgtatcagaaacaaggatcgtccagcgatgcagctg
taccagcccggagcccgaagccgaagcagattgtgtcagtatgaagacagtgctgccaag
gccgcagatcagggagcggagaagaaacaagagagtgagagcagtaacacgaaggaagag
gagtga
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