Numida meleagris (helmeted guineafowl): 110405346
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Entry
110405346 CDS
T06015
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110405346 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmel03041
]
110405346 (DDX46)
Enzymes [BR:
nmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110405346 (DDX46)
Spliceosome [BR:
nmel03041
]
Complex A
U2 snRNP components
U2 related factors
110405346 (DDX46)
Complex B
110405346 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
110405346
NCBI-ProteinID:
XP_021266252
LinkDB
All DBs
Position
12:complement(15210553..15231582)
Genome browser
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNRKTENRSRSKER
TEGVEVSKEKKKEKDDKEEEKDKDATASTVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAVVETEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
MEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GFAYTFITEDQARYAGDIIKALELSGNPIPADLEKLWADFKEQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMGTPGSS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtccaggcattatcggaagcgctctgcgtcgcggggacgctctggtagc
cgctccagaagtcgttctccatctgacaagaggaaacgtgaagacagacgctccaggagt
agagatcgagatcgcagacgtgagcggtcgcgcagcagggacaagagaaggtctcgttcg
cgtgacaggaagcgccagagacgttcaagaagcagagagagggaacggagtcgggagaga
agaagatcgcgaagccgagagagaaggcgctctaggagcagaagtagaggcaggcggtct
cgatcccccagtccaagcaagaacaggaagacagaaaacagatcaagatctaaagaaagg
acagaaggtgtggaagtttccaaagaaaagaaaaaagagaaagatgacaaagaagaagag
aaggacaaagatgctactgcatcgactgtggccaccgagaattttgatcagaacaaacta
gaagaagaaatgagaaaacgaaaagaaagagtggagaagtggagggaggagcaacgcaag
aaggctatggaaaacattggagaactgaaaaaagaaattgaggagatgaaacagggaaaa
aaatggagtttggaagatgatgatgatgatgatgaggagactgcagaaggagaaaaagaa
ggcaatgaagtcgaagatgaagagttagatcctttggatgcttatatggaagaagtaaaa
gaggaggtcaagaagttcaatatgagaagcgtaaagggtggaggtgggagtgaaaagaaa
tctggaccaactgttaccaaagtagtaaccgtggtgacaaccaaaaaggcagttgtagag
acggaaaagaagaaaggggaactcatggagaatgaccaagatgcgatggagtattcttca
gaagaagaggaagttgatcttcagactgccctaactggctatcagaccaagcagagaaag
ctgctagaaccagtggatcacggaaaaatagaatatgagcccttcaggaaaaacttctat
gttgaagtacctgaactagctaaaatgacacaagaagaggtgaacgtgtaccggctggag
atggagggaataacggtcaagggaaaaggctgccccaaaccaataaaaacctgggtacag
tgtggtatttccatgaagattcttactgctctcaaaaaacatggctacgaaaaacccacg
cccattcaaagccaagccatcccagcaattatgaatggtcgcgacttgattggcattgct
aaaacaggaagtgggaaaactatcgcatttctgttgcccatgttcagacacattatggat
cagagagctttagaagaaggagaaggtcccatagctgtcattatgacacctactcgtgag
ttggctttgcagattaccaaggagtgtaagaaattctcaaagacccttggacttcgggtt
gtttgtgtttatggaggaacaggaataagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaatctccgcagagtcacgtatgttgtccttgatgaagcagacagaatgtttgac
atgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagact
gtcatgttctctgctacttttcccagagctatggaggcattagctcggagaatcctaagt
aaacctatagaagtgcaggttggaggcagaagtgttgtctgttctgatgtggagcagcat
gttattgtgatagaagaggagaataagttcttaaagttactagagctactgggacactat
caggagaaaggctcagttatcatctttgtggataaacaagaacacgctgatgggttgttg
aaagatttaatgagagcttcttatccctgcttgtctcttcacggaggcattgatcagtat
gacagggacagcataattaatgatttcaagaatggcacttgcaagcttctggtggccacg
tctgtagctgcaaggggcttggatgtaaaacaattgatgctagtggtcaattatagttgt
cccaaccattatgaagattatgtgcaccgagcaggccgaactgggcgagctggtaataaa
ggatttgcatatacgttcattactgaggatcaggcacggtatgctggtgatatcattaag
gctttggaattatctgggaatccaattcctgctgatttggagaagctctgggctgacttc
aaagaacaacagaaggctgagggaaagctgattaaaaaaagcagtggattctctggcaaa
ggctttaaattcgatgaaacagaacaggccttggctaacgaaagaaagaagttacagaag
gcagctcttggcttgcaggattcggatgatgaggatacagctgttgatattgacgaacaa
attgaaagcatgttcaattcaaagaaaagagtaaaagacatgggaacaccgggatcttca
aacgctcctacaccatcagctggcaatgcagaaaaactggaaattgctaaaagattggct
ttgagaatcaatgcccagaagaatcttggagcagaggcacaagtatttgtccccttccat
tttaaggatgtgatgcagcaggctacaaacgctatccttagagggggcacaattcaagct
cctacagtgtctgccaagaccattgcagagcaattggctgaaaaaatcaatgctaagctg
aattatgtacctatagagaagcaggaggaagagaaacaggatggaggacaaaacgaatct
tttaagagatatgaagaagaattagagatcaatgacttcccacagactgccagatggaaa
gttacctccaaagaagcactacagagaatcagtgaatattctgaagctgctattacaatc
agaggaacttatttccctccaggcaaagaacccaaggaaggagagcgaaagatttatttg
gctatagagagtgccaatgaattggctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaagagctcattcgattgcaaaactcataccaaccaaccaacaaaggaagatac
aaagttctatga
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