Numida meleagris (helmeted guineafowl): 110407158
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Entry
110407158 CDS
T06015
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
nmel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110407158 (UPF3A)
03015 mRNA surveillance pathway
110407158 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110407158 (UPF3A)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110407158 (UPF3A)
mRNA cycle factors
P-body specific factors
110407158 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
110407158
NCBI-ProteinID:
XP_021270187
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All DBs
Position
1:complement(134702782..134728053)
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AA seq
540 aa
AA seq
DB search
MQTTTTPSDGGRWYPGGGGTPLAPQRGLAIFRPANGQFSRGFRLAAGGGSMRSDREPGQG
LGLVRGGGREKRAMEVPLRRESPRREPDTAPNPPPSPAPPLPPAPGKQRDEKKTALSKVV
IRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRF
DGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEEKI
CANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLRE
EEKRKRREEERRKRKEAEKHKKISEKEIRIKLLKKPEKGDEPASEKHKEKDEEADTEENK
WDKSPGPGSMRSKSLEGSLKDLKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHR
AHYEFDKFVRRNEEELKWVKGYNQDRGKKGNHNYSFTVEAVDKLGKEDKCDDMASKKERI
RNKDRPAMQLYQPGARIRTPVGSTSKAYDCSGKSSEDALDKKYEVDNSVGGGSEKSEEEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaccaccaccccctcagacggcggccgttggtaccccggaggcggaggaact
ccgctagcccctcagcgaggtctcgcgatattccgcccggcaaacgggcagttctcgcga
ggtttccgcctcgctgcgggcggcggctccatgcggtcggatcgggagccggggcagggg
ctggggctggtgcggggcggcggccgcgagaagcgggccatggaggtaccgctgcggcgg
gagtcgccgcgccgcgagccggacaccgcgccaaacccgccgccgtccccggcgccaccg
cttcccccggcgccgggtaaacagcgagatgagaaaaaaacggcgctgagcaaagtagtt
attcgacggcttcctccttgtctaaccaaggagcagctagaggagcagctacaccctctc
cctgcccatgattattttgagttttgcactgctgatcccagcctttatcctcatctctac
tcaagagcatacattaactttagaaatcctgaggacatccttctttttagagatcgcttt
gatggctatgtcttcattgataataaaggtttggagtaccctgcagttgttgaatttgct
ccattccagaagatttcaaaaaagaagttaaaaaagaaagatgccaaagctgggagcatt
gaagatgacccagaatataggaaatttttagaaagttactgtgctgatgaagagaaaatc
tgtgccaaccctgagactcttttgggagagattgaggccaaaacaagggaactcattgct
agaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcagagaatt
cgagaagagaaaagagaagaacgaaggcggagagaactggagaagaagcgtctgcgagaa
gaagagaaaaggaaacgcagagaagaggaaagacgtaaaaggaaagaagcagagaaacat
aagaaaatttctgaaaaagaaataaggatcaagcttcttaagaagcctgaaaaaggagat
gagccagccagtgaaaagcacaaggaaaaagatgaggaagccgatactgaagaaaacaaa
tgggataagtctcctggacccgggagtatgagatccaaatcattggaaggttcactaaaa
gatcttaaggagaagtcacaaaatgatagtgacaaagagcaaagagatttggagagaaga
tttcgagaaaaagaacctgaaaggcaaagatatcgactggatgatggcagaaagcataga
gctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaatgggtgaaa
ggatacaaccaagacagaggaaagaaagggaaccacaactacagcttcactgtggaggca
gtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcata
agaaataaggatcgcccagccatgcagctgtaccagccaggggctcgcatccgaacacct
gtgggatccacgagtaaagcctatgactgcagtgggaagtcttctgaagatgctcttgac
aaaaagtatgaggtggataactcagtgggaggtggttctgagaagagtgaggaagaagaa
taa
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