KEGG   Numida meleagris (helmeted guineafowl): 110407320
Entry
110407320         CDS       T06015                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4-like
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03015  mRNA surveillance pathway
nmel05164  Influenza A
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110407320
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110407320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nmel03021]
    110407320
   03019 Messenger RNA biogenesis [BR:nmel03019]
    110407320
Transcription machinery [BR:nmel03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110407320
Messenger RNA biogenesis [BR:nmel03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110407320
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus Sina_RING
Other DBs
NCBI-GeneID: 110407320
NCBI-ProteinID: XP_021270564
LinkDB
Position
17:5537820..5540643
AA seq 213 aa
MQELVAGVERIRFDAEADLEQQQGAQLPPFPGECSSEDCPFPLADATAGTVGCPWYDQGF
CRHGPLCRYKHTQRVMCANYLAGFCPEGPTCKFMHLKAALMMHGTDPAKGAECPQKPGVA
GSTARRESGCKDVSPAGPLLLVTSTTQSLAVQPRDPRNDPPILQCPPEPGICFKCRQKGH
YVGKCGKNQMEILLRKRVLSQGKQKEDTGRCTT
NT seq 642 nt   +upstreamnt  +downstreamnt
atgcaggagctggtggctggtgtggagaggatcagatttgatgcagaggctgacctagag
cagcagcaaggagcccagctgccccccttcccaggcgagtgcagcagtgaggactgtccc
ttcccacttgctgatgccacagctggcaccgtgggctgtccctggtatgaccaaggcttc
tgcaggcatggtcccctgtgcaggtacaagcacacacagagggtgatgtgtgccaactac
ctcgctggcttctgccctgaaggacccacatgtaaattcatgcacctcaaggccgcgttg
atgatgcacggcacagatccagcaaagggagcggagtgtcctcagaagccaggtgtggct
ggatccactgccagaagggagagtggctgcaaagatgtgtcacctgcagggcccctgctg
ctagtcaccagcaccactcagtccctggcagtgcagcccagggacccccgcaatgatccc
cccatcctacagtgcccaccagaaccaggcatctgcttcaagtgcagacagaaaggtcac
tatgttggcaagtgtgggaagaatcaaatggaaatcctgctgaggaaacgagtgctctca
cagggaaagcagaaggaagacacggggaggtgtacaacatga

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