Natrialba magadii: Nmag_1980
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Entry
Nmag_1980 CDS
T01176
Symbol
hef
Name
(GenBank) ATP-dependent RNA helicase/nuclease Hef
Organism
nmg
Natrialba magadii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
AMPK_alpha_AID
Motif
Other DBs
NCBI-ProteinID:
ADD05551
UniProt:
D3SVE3
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Position
complement(2013116..2015605)
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AA seq
829 aa
AA seq
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MAAQDEEPPSIDHPLLESNFLERRLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVTARR
LDEVGGTSLMLAPTKPLVQQHADFYREALQIPDEEIVVFTGDVSPDNRAELWEEATIVMA
TPQVIENDLVGSRISLADVTHLTFDECHRATGDYAYNYIAERYHADATDPLVTGMSASPG
GDEEAILEVCENLGLQEVEVMTEEDADVDEFTHDTEVEWERIDLPDDVLEIRDALNEVIT
DRLEKLKELGVAKSTQPDQSQKDLNRMRAELQQLINNDQSEGFKGMSVHAEVMKLRQAVT
LVETQSVEALRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDELHPKYRKTR
MLLAETLGLEGGERVIVFTESRDTAEALTAFLSDSFDAKRFVGQGDREGSDGMTQKQQQE
VLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQSEGRVVV
LMAEDTRDEAYFWISRRREKEMESELRELKGMADDLAEELDESQQSLADFGGDSSSASGA
ADNENESEVKVDENTTNPDAVSDSSSGSGGGSDQPGLREFDAASDDDETADGDSDSETDN
VETHEPSAEGDAIEIVADQREMDANIARDLSRREEIEVRLETLDVGDYVLSDRVVVERKS
VADFVDSLVGGDRSVFEQVGAMARHYARPIVVVEGDGLYEQRDIHPNAIRGSLSSLAVDF
GASVLRTEGEAETMELFAVIAGREQKLSDREVSVHGEKQSKTLAEQQEYVVSSIAEIGPV
TARSLLEEFGTVEAVMIATEDELQAADGVGQVTAERMREVIGSDYSNYS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaggacgaggagccgccctcaatcgatcacccgctactcgagtccaacttt
ctcgagcgccgcctctaccagctgaaactcgccgggaccgccgcgaacggtcacacgctc
gtctgtctcccgacgggcctcggcaagacgaccgtaagcctgctcgtgacggcgcgacga
ctcgacgaggtcggcggcacgtcgctgatgctcgcgccgacaaagcccctcgtccagcaa
cacgccgacttctaccgcgaagcgctccagatacccgatgaggaaatcgtcgtcttcacc
ggcgacgtgagcccggacaaccgcgccgaactgtgggaggaggcgacgatcgtgatggcc
actccgcaggtgatcgagaacgacctcgtcgggagccgaatctcgctcgccgacgtgacc
cacctgacgttcgacgagtgccaccgcgcgaccggcgactacgcctacaactacatcgcc
gagcgctaccacgcggacgcgacggacccgctcgtgacggggatgtcggcctcgcccggc
ggcgacgaggaggcgatcctcgaggtctgtgagaacctcggcctacaggaagtcgaggtg
atgaccgaggaggacgcagacgtcgacgagttcacccacgacacggaggtcgaatgggag
cggatcgacctccccgacgacgtgctggagatccgcgacgcgctgaacgaggtgatcaca
gaccgactcgagaaactcaaagaactgggcgtcgcgaagtcgacccagcccgaccaatcc
cagaaggacctgaaccggatgcgcgccgagttacagcagttaatcaacaacgaccagtcg
gaggggttcaagggaatgtcggttcacgcggaggtgatgaagctccgccaggcggtcacg
ctcgtcgaaacacagagcgtcgaggctctgcggcggtacttcgaccgccagcgcaaccag
gcccgctcctcaggcgcgtcgaaggccagccagcggatggtctcggacccgcgcgttcgt
gaggccatgcgaaaggccgaaagcttcgacgagttacatcccaagtaccgcaagacgcgg
atgctcctcgcggaaacgctcggactcgagggcggcgagcgcgtgatcgtcttcaccgag
tcccgagacacggcggaggcgctgacggcgttcctctcggatagcttcgacgcgaagcgc
ttcgtcgggcaaggcgaccgcgaggggtcagacggtatgacgcagaaacagcaacaggaa
gtgctcgacgagttccgcgccgccgagttcgaggtgctcgtctccacgtcggttgccgaa
gaggggctcgacgtgcccgaagtcgacctcgtgctcttctacgaaccggtccccacggcg
attcggtccattcagcgcaagggccggaccggccgccagtccgagggccgtgtcgtcgtc
ctcatggccgaagacacccgcgacgaggcctacttctggatctcccgccgccgcgagaag
gagatggaatccgaactgcgcgaactgaaagggatggccgacgacctcgccgaggaactc
gacgagtcccagcagtcgctcgccgatttcggcggggactcgagtagcgccagtggtgct
gctgacaacgaaaacgaaagcgaagtgaaagtagacgaaaacaccaccaatcccgacgca
gtctccgactcttccagtggaagcggagggggttcggatcagccagggctgcgggagttc
gatgcggccagcgacgacgatgaaacggcggacggcgactcggacagcgagaccgacaac
gtggagacgcacgagccgtcggccgagggcgacgcgatcgaaatcgtcgccgaccagcgc
gagatggacgccaacatcgcccgcgacctctcccgacgtgaggagatcgaggttcgactc
gagacgctcgacgtgggcgactacgtcctctcggatcgcgtcgtcgtcgaacgcaagtcc
gtcgccgacttcgtcgactcgctggtcggcggtgaccgctccgtcttcgagcaggtcggt
gcgatggctcgccactacgcccggcccatcgtcgtcgtcgagggcgacggcctgtacgaa
cagcgggacatccacccgaacgcgattcgtgggtcgctttcgagtctggctgtcgacttc
ggcgcgagcgtgctccgaaccgagggagaagcggagacgatggaattgttcgcggtgatc
gcaggtcgggaacagaaactctcagaccgtgaggtctcggtccacggcgagaagcagtcg
aagacactggccgaacaacaggagtacgtcgtctcctcgatcgcagaaattggaccggtg
acggcgcgctcgctactcgaggagttcggcacggttgaagcggtgatgatcgcgaccgaa
gacgagttgcaggcggccgacggcgtcggacaggtgactgctgaacggatgcgcgaagtg
attgggagcgactacagcaactactcttaa
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