Natronomonas moolapensis: Nmlp_1093
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Entry
Nmlp_1093 CDS
T02478
Name
(GenBank) homolog to ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nmo
Natronomonas moolapensis
Pathway
nmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nmlp_1093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmo03019
]
Nmlp_1093
03016 Transfer RNA biogenesis [BR:
nmo03016
]
Nmlp_1093
Enzymes [BR:
nmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Nmlp_1093
Messenger RNA biogenesis [BR:
nmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nmlp_1093
Transfer RNA biogenesis [BR:
nmo03016
]
Prokaryotic type
tRNA degradation factors
Nmlp_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CCQ35304
UniProt:
M1XN44
LinkDB
All DBs
Position
complement(93815..95119)
Genome browser
AA seq
434 aa
AA seq
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MTDRDEQAYAGTAEGQGPVRIDEDLARHLANKREELFEEFEIRDEFPNEVLEEAETRAND
PQGDIETELEERRDLRELTTWTTDPADAQDFDDAISIERTDKGYRLWVHIADVSHYVTPD
TSMWEEALKRANTVYLPAYTIHMLPPILAETVCSLVPNEDRLAHTVEMHINGETLSHESI
DIYKSVIHSDARQTYNDCEDRLEDDDAPLHDENALAYELAEKLHEQRKTDGSLVLNPKRD
RAHTIIEECMLKANKAVTHELQWNRGLEAMFRVHPQPTPQEWDEALQEIQDLDGVSIPGD
AWDDPRKAVNATLEEAPGRQLNKIQWAVMKVMPRAKYMSDPFGGHHALNFEIYGHFTSPI
RRLSDLVNHWIIHTNDVPEGIADLCDHASDKQKDGETCERIYKDFLEEVGLDPHAVNNRG
LETVDDPEDAEYTA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgcgacgagcaggcgtacgccggaaccgcggaggggcagggtcccgtcagg
atcgacgaggacctcgcccgccacctcgcgaacaagcgcgaggagctcttcgaggagttc
gagattcgcgacgagtttccgaacgaggtactggaggaggcagagaccagggcgaacgac
ccgcagggggacatcgagacggagctcgaagagcgccgcgacctccgggagttgacgacg
tggacgacagaccccgcggacgcccaggacttcgacgacgccatctcgatcgagcggacg
gacaaggggtaccgcctgtgggtccacatcgcagacgtgagccactacgtcactcctgac
acctcgatgtgggaggaggccctgaaacgcgccaacacggtgtacctccccgcctacacg
atccacatgctcccgccgatcctggcggagacagtctgttcgctcgtgcccaacgaggac
cgcctcgcccacacggtcgagatgcacatcaacggggaaaccctctctcacgagtcgatc
gacatctacaagtctgtcatccactccgacgcccgccagacgtacaacgactgcgaggac
cgcctcgaggacgacgacgccccgctgcacgacgagaacgccttggcatacgagctcgca
gagaagctccacgaacagcgaaagaccgacggctcgctcgttctcaatcccaagcgcgac
cgcgcccacacgatcatcgaggagtgtatgctcaaggccaacaaagccgttacgcacgaa
ctccagtggaaccgcggtctcgaagcgatgttccgcgtccacccgcagccgaccccacag
gagtgggacgaggcgctccaggagatacaggacctcgacggggtctcgataccgggcgac
gcctgggacgacccgcgaaaggccgtcaacgcgaccctggaggaggcccccgggcgacag
ttgaacaagatccagtgggccgtcatgaaagtgatgccccgggcgaagtacatgtcggac
cccttcggcggtcaccacgcgctgaacttcgaaatatacgggcacttcacctcaccgatc
cgacggctctcggatctcgtcaaccactggatcatccacacgaacgacgtccccgagggc
atcgcggacctctgtgatcacgccagcgacaaacagaaagacggcgagacctgcgagcgg
atctacaaggacttcctcgaggaggtcggtctcgacccccacgcggtcaacaaccgtggg
ctcgagaccgtcgacgacccggaggacgccgaatacacggcgtag
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