Neisseria meningitidis 510612 (serogroup A): NMA510612_1651
Help
Entry
NMA510612_1651 CDS
T03438
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nmx
Neisseria meningitidis 510612 (serogroup A)
Pathway
nmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NMA510612_1651 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmx03400
]
NMA510612_1651 (mfd)
Enzymes [BR:
nmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMA510612_1651 (mfd)
DNA repair and recombination proteins [BR:
nmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
NMA510612_1651 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
CarD_TRCF_RID
Helicase_C
ResIII
ERCC3_RAD25_C
HemY_N
Glyco_tran_WecG
AAA_30
YmdB
AroM
DUF4217
Motif
Other DBs
NCBI-ProteinID:
AHW75937
UniProt:
X5F7E5
LinkDB
All DBs
Position
1402532..1404706
Genome browser
AA seq
724 aa
AA seq
DB search
MGEGWGEGKAVADQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIGDP
VVHEEHGIGRYMGLVTIDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIAL
HKLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEET
EDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRSAFVAVMGGKQVAVLAPTTLLV
EQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKN
LGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSR
RLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAH
GQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGR
VGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQS
GEMIQVGFTLYTEMLKQAVRDLKKGHQPDLDAPLGITTEIKLHSPALLPESYCPDIHERL
VLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGINAIDAAGEA
VTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNR
CLPK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagggttggggagagggaaaagcagttgccgaccaaagtgccatcgccgtcatt
accgaatccgacctctaccaatacgtcgcccgttcgcgcgtccacaaccgccgcaagaaa
cacgccgccgtttcagacggtctgttgcgcgaccttgccgaaatcaatatcggcgatccc
gtcgtgcacgaagaacacggcatcgggcggtatatgggcttggtaacgatagatttgggc
ggcgaaaccaacgaaatgatgttgctcgaatacgcaggagaagcgcagctttatgtgcct
gtttcgcaactgcatttaatcagccgctactccggtcaggcgcatgaaaacattgccctg
cacaagctcggcagtggcgcgtggaacaaggcgaagcgcaaagccgccgaaaaggcgcgc
gataccgccgccgagttgcttaacctttacgcccgacgtgccgcccaatcgggacacaag
tttgaaatcaacgagttggattatcaggcgtttgccgacggcttcggctacgaagaaacc
gaagaccaggcagccgccatcgccgccgtgattaaagatttgacgcaggcgaagccgatg
gaccgcctcgtgtgcggcgatgtcggtttcggcaaaaccgaagtcgccctgcgctccgcg
tttgtggcggtaatgggtggcaaacaagttgccgtactcgcaccgaccacgcttctggtc
gagcagcacgcgcaaaattttgccgaccgcttcgccgatttccccgtgaaagtcgccagc
ctttcgcgtttcaacaacagcaaagccaccaaagccgcgctggaaggcatggcggacggc
acggtcgatattgttatcggtacgcacaaactggtgcaggacgacataaaattcaaaaac
ttaggtttagtgattatcgacgaagaacaccgcttcggcgtgcgtcagaaagagcagctc
aaacgcctgcgcgccaatgtcgacatccttaccatgaccgctacgccgattccgcgtact
ttaagtatggcgctggaaggactgcgcgacttctcgctgattaccactgcgcccagccgc
cgcctcgccgtcaaaacctttgtcaaaccgttcagcgaaggcagcgtgcgcgaagccgta
ttgcgcgaactcaaacgcggcgggcaagtatttttcctgcacaatgaagtggataccatc
gaaaacatgcgtgagcggctggaaaccctgctgcccgaagcccgcatcggcgtggcgcac
ggacaactgcgcgagcgcgagctggaacaagtcatgcgcgactttttgcagcaacgattt
aacgtgttgctctgttccaccatcatcgaaaccggtatcgacattcccaacgccaacacc
atcatcatcaaccgtgccgacaaattcggattggcgcagctgcaccagcttcgcgggcgc
gtcggccgcagccaccaccaagcctacgcctacctgctcacgcccgaatacatcaccaaa
gacgcagaaaaacgtctcgacgccatcgcggcggcagacgaactcggcgcaggtttcacc
ctcgccatgcaggatttggaaatccgcggcgcaggcgaaatcctcggcgaaggacaatcc
ggcgaaatgatacaggtcggcttcacgctctacaccgaaatgctcaaacaagccgtgcgc
gatctcaaaaaaggccaccagcccgaccttgacgcaccgttgggcatcaccaccgaaatc
aaactgcacagccccgccctactgcccgaaagctactgccccgacatccacgaacggctc
gtcctctacaaacgcctcgccgtctgcgaaaccgtgcaacaaatcaacgccatacacgaa
gaactcgtcgaccgcttcggactgcccgaacaacccgtcaaaaccctcatcgaaagccac
cacttacggcttatggcaaaagaattgggtatcaatgccattgatgcggccggcgaagcg
gtaacggtaacctttggcaaaaacaacaatattgatccaaccgaaatcatcctgctgatt
cagaacgacaaaaaataccgccttgccggcgccgataagctgcggtttaccgcagagatg
gaaaatatcgaggtcagaatcaacaccgtaaaaaacgttttaaaaaccttgcaaaacaga
tgcctgcccaaataa
DBGET
integrated database retrieval system
