Nipponia nippon (crested ibis): 104009255
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Entry
104009255 CDS
T05756
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104009255 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nni01002
]
104009255 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104009255 (USP1)
03400 DNA repair and recombination proteins [BR:
nni03400
]
104009255 (USP1)
Enzymes [BR:
nni01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104009255 (USP1)
Peptidases and inhibitors [BR:
nni01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104009255 (USP1)
Ubiquitin system [BR:
nni04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104009255 (USP1)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
104009255 (USP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF2514
Motif
Other DBs
NCBI-GeneID:
104009255
NCBI-ProteinID:
XP_009459490
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MPGVLPSDSTGPARGSPSKKNRLSLKLFQKKEAKRALDFTESQENEQKSSEFRGSEIDQV
VPAAQPPSLVSCEKKDSMLPFVGLNNLGNTCYLNSVLQVLYFCPGFKTGVKHLYNIISKK
KESLKDEGEQKAEKGNCKEDPLASYELICSLHSLILSVEQLQASFLLNPEKYTDELATQP
RRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEELNKLPVEEPTAKLEEK
LNQNPESNGTGNAAEEEDNVPSNHVGEIAEDKLLKGNGKRKSDAEGGNAKKKSKVSKEQI
AAEENQRQTRSKRKATGEKLENQTDAIAKCSSENESAKPTQKKSRLRLNWLKSSCKQPSI
LSKFYSLGKLTTNLGSKDTGKEYDDCELEDSSVKCENGNNIKEEYREPASPVESHNEKGT
EKEPNKEGTELAVFELVEKLFQGQLVLRTRCLECECFTERREDFQDISVPVQEDELSKTE
ESSEISPEPKTEMKTLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVIT
IHLKCFAASGLEFDCYGGLSKINTPLLTPLKLSLEEWSTKPTNDTYGLFAVVMHSGITIS
SGHYTASVKITDLNSLELDKGNFITDQMYEMIKPEPLNEEEARTVAEDYDDGEVSFRVNG
NAQPGKVLNKKNMEAVGLLGGQKSKSDCDLYNNKLANPEKFLNVVTENRNPESSSSNGSV
ECSTEHSVQNGVASSGLENKALYVLQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPTSS
STSTPYLLFYKKIVE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggtcttgccgagtgacagcaccgggcctgcgagagggagcccctccaagaag
aaccggctttcgctgaagctcttccagaaaaaggaggcgaaaagagcactggattttaca
gagtcccaggaaaatgaacaaaagagttcagaattcagaggctctgagattgatcaggtt
gttcctgcagcacagcctccctcgcttgttagctgtgagaaaaaagacagcatgttgcct
tttgtgggcttgaacaatctgggtaacacttgttaccttaacagcgtacttcaggtatta
tatttttgtcctggttttaaaactggagtaaaacatttatataatatcatttcaaagaag
aaagaatctttgaaggacgaaggagagcaaaaagcagaaaagggaaattgtaaagaagat
ccactggcaagttatgagctaatctgcagtttgcactcattgattctttcagttgagcag
cttcaagccagctttctcttaaatccagaaaaatacacagatgaacttgctactcagcca
cgaaggctactaaatacccttagagagctcaaccctatgtatgaaggctacttgcagcat
gatgcccaggaagttctgcagtgtatcctgggtaacattcaagaaacatgtcagctactg
aagaaggaagaattgaacaaactgcccgtggaagagcctacagctaaactggaggaaaaa
cttaatcaaaatcctgagagcaatggaactggcaatgctgcggaggaggaggataatgta
ccaagtaaccacgttggagagatagctgaagacaagctactcaaaggaaatgggaaaaga
aaaagtgatgctgagggtggcaacgcgaagaaaaaatccaaagtatcaaaagagcaaatt
gcagcagaagaaaatcaaagacaaactaggtcaaagaggaaagcaacaggagaaaagcta
gaaaatcaaactgatgccattgccaagtgttccagtgaaaatgagagtgcgaagccgaca
cagaagaagtcacggcttagattaaactggttaaaatcttcgtgcaaacagcctagtatt
ctgtctaaattttatagtctaggaaagttaactacaaacttgggatccaaagacacaggg
aaagaatatgatgactgtgagcttgaagactcatctgtaaagtgcgaaaatggtaacaat
attaaagaagaatatcgtgaaccagcgtctcctgtggaaagccataatgaaaaaggaact
gaaaaagaaccaaataaggaaggtacagagctggctgtttttgaactagtggagaagctg
ttccagggccagttagtactgagaacaagatgcctggagtgcgagtgctttactgaaaga
agagaagattttcaggacatcagtgttccagtgcaagaagatgaactttccaaaactgaa
gagagttctgaaatttctccagagccaaaaacagaaatgaagactcttaaatgggcaatt
tcacagtttgcgtcagtggaaaggattgtgggagaggataaatatttctgcgaaaactgc
catcattacacagaagcagaacgcagccttttattcgataaaatgcctgaagttataaca
attcatttgaagtgctttgctgctagtggcttagagtttgattgctatggtgggctatcc
aagataaacactcccttactgacgcctctcaaactgtcactagaagaatggagcacaaag
ccgaccaatgacacctatggattatttgcagtggtaatgcacagcggcattacaattagc
agtggacactacacagcttctgttaaaattacagatcttaatagcctagagttagataag
ggaaatttcatcactgaccaaatgtacgaaatgattaaaccagaaccactgaatgaggaa
gaggcaagaactgttgctgaagactacgatgatggtgaagtctcttttagagtcaacgga
aacgcacagccaggtaaagttctgaacaaaaagaatatggaagctgtcggacttcttggg
gggcagaagagcaagtctgactgtgacctgtacaacaacaaactagctaaccctgagaag
tttcttaatgtagttactgaaaacagaaatcccgagtctagcagtagtaacggaagcgtg
gagtgcagcacagaacacagtgtgcaaaatggtgttgcttccagtggactagaaaacaaa
gctctgtatgtactgcagagcctgaaagagtatgaaggaaagtggttgctttttgatgat
tctgaagtgaaggttacagaagaaaaggactttctgaattctctttctccgacatcgtca
tctacatcaactccttacctactgttttataagaaaattgtagagtga
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