Nipponia nippon (crested ibis): 104009447
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Entry
104009447 CDS
T05756
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nni01002
]
104009447 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104009447 (USP47)
Enzymes [BR:
nni01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104009447 (USP47)
Peptidases and inhibitors [BR:
nni01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104009447 (USP47)
Ubiquitin system [BR:
nni04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104009447 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104009447
NCBI-ProteinID:
XP_009459721
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MKEFVSMNLYLEDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVT
LNLPASTPLKRLFEDVASKVGYVNGTFDLVWGNGDNITDTTPIDQNSDKTILDAGFEPGK
KNFLHLTDKDGEQPHIMPEESGTTDDSAQERFIGPLPREGSVGCTNDYVSQSYSYSSVLS
KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFI
DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKASSE
KSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSG
SRGYYSSAFASSTNAYMLIYRLKDSTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQRE
IERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKY
DEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVV
DLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTL
KAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAV
YQKSSGDSGNLDEACERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTE
ASDFENIESPLNEIDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDI
LSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDE
SGKSRGEAQYMYFKSEPYTADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFK
VFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFL
LDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDIN
ISSNWEVFLEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSE
ISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKT
EELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttgttagtatgaatttatatcttgaggatatgttttggagttgcagacaa
agtatctttgctgaaatgaagaagaaattttcacaggtggaaagtgctgctgaggagccc
agggtgctgtgtataatacaagataccacaaattccaagacagtaaatgagcgtgttacc
ttgaacctgccagcttccacgccacttaaaaggctgtttgaagatgtggcttcaaaagtg
ggctacgtgaatggaacttttgatctagtatggggaaatggagataatataactgatacg
actccaatagatcagaacagtgacaaaactattcttgatgctggttttgagccagggaag
aagaactttctgcatttgacagacaaagatggtgagcagcctcatataatgccggaggag
tcgggtacaacagatgacagtgcacaagagagatttataggccctcttccgagagaaggc
tctgttggctgtaccaatgactatgtcagtcaaagctactcttattcttcagtcctgagc
aaatcggagacaggttatgtgggtctagtaaatcaagcgatgacttgttacttgaatagc
ctgctacaaacacttttcatgactcctgaatttagaaatgctttatataaatgggaattt
gaagaatctgaagaggatcctgtgacaagtatcccctaccagcttcaaagactgtttgtt
ttactgcagaccagcaaaaaaagagcaattgaaacaacagatgttacgcggagttttgga
tgggatagtagtgaggcatggcagcaacatgatgtacaggagctttgtagagtcatgttt
gatgctttggagcagaaatggaagcaaacggaacaggccgatctgataaatcaactatac
caaggcaaactgaaggactatgtaagatgtctagaatgtggctatgaaggctggagaatc
gacacttacctggatattcctttggtcatccggccgtatggctccaaccaggcgtttgct
agcgtggaagaagcactgcatgctttcattcagcccgagattcttgatggccccaatcag
tatttttgtgaacgatgtaagaagaaatgtgatgcaaggaagggtctgcggttcttgcat
tttccgtacctgctgacattacagctgaagagatttgacttcgattacaccactatgcac
agaattaaactcaatgatcgtatgacttttcctgaggagttagacatgagtgtcttcatt
gatgttgaagatgagaagtctcctcagactgagagttgcacagatagtggagctgaaaat
gaaggcagttgtcacagtgatcagatgagcaatgatttttctaatgatgatggagttgat
gaaggaatctgccttgaaagcaatagtgcagcagaaagaatttctaaagctagcagtgaa
aagagttctttactgtatgagctcttttctgttatggttcattctggaagtgctgctggt
ggccattattatgcctgtataaaatcttttagtgatgaccagtggtacagctttaatgat
cagcatgttagcaagataactcaggaagatattaagaaaacgtatggtggatcttccgga
agcagaggctattattccagtgctttcgccagctccacaaatgcatacatgctgatatat
agattgaaggattcaacgagaaatgcaaagtttcttgaggcacatgagtatccagagcat
attaaacaactggtacagaaagagagagaattggaagaacaagaaaagaggcaacgtgaa
attgagcgcaacacttgcaagattaaattgttctgcatgcatcctacaaaacaaataatg
atggagaacaaattagaggttcacaaggacaggacactgaaggaagctgtggaaatagct
tacaagctaatggatttagaagaggctgttcctttggattgctgtcgtcttgtcaaatac
gatgagtttcatgactacttggaacgatcttatgaaggagaagaggatacaccaatgggt
ttattacttggaggtgtcaaatcaacatacatgtttgacttactgttggaaacaagacga
cctgaccaaattttccagtgctataaacctggtgaggtcatggtaaaggttcacgtagtt
gacctgaagactgaatctgttgctcctccaataagcgtacgagcttatttgaatcaaaca
gtttcagagtttaaacagctaatttcaaaggctacacacctgcccgctgaaacaatgcgg
gtagtattagaacgttgctacaatgacttgcgtcttctgaacgtttccagcaaaacactg
aaagctgaaggcttttttagaagcaacaaggtatttattgaaagctcagagtctttagat
cgtcatgtggcatatacagattctcatttatggaaacttttggatcgtcatgcaaataca
atcagactatatgtttcattaccagagcaatcacctggatctcagtttagacgagcagtt
tatcagaagtctagtggagattcaggcaacttggatgaagcctgtgaaagagtaaaagga
cctgtaggaaatatgaaatctgtagaggcaattctggaagaaagcactgaaaagcttaaa
agcttgtccctgcagcagcagcaggagggagataatggagacagcagcaaaagcacagaa
gccagtgattttgaaaacattgaatcacctttaaatgaaatagactcttcagcatcagca
gaaaacagagaacttgaaaaccaaattcagatttccgatccagaaaatctccaatccgag
gaacggtcagattcagatgtaaataatgacaggagtacaagttctgtggacagtgacatc
ctcagctccagtcatagcagtgatactttatgcaatgtggacaatgccccactgcccttg
gctaatgggcttgattctcatagtatcacaagtagtaggcgatcaaaagcaaatcaaggg
aagaaggaaacctgggacacagcagaagaagattctggaacagatagtgaatacgatgaa
agtggcaagagcagaggagaagcacaatacatgtactttaagtcagaaccctacactgca
gatgaaggttcgggagaagggcaaaaatggctgatggtgcatgttgataaaagaattaca
ctgtctgccttcaagcaacatttggagccttttgttggagttccatcttctcacttcaaa
gtctttagagtctatgccagcaatcaagagtttgagagtgttcggctgaatgagacactt
tcatcattttctgatgacaataagataactattagacttggaagagcccttaagaaaggt
gaatacagagtcaaagtctatcaacttttggtaaatgagccagagccatgcaagtttctt
ctagatgcagtttttgctaaaggaatgactgtccgacagtcaaaagaggaactgcttcct
cagcttcgagaacaatgtggcctagacttgacaattgacaggtttcgcctacgaaagaaa
acctggaagaacccaggcactgtgtttctagattatcatatctatgaagaagacatcaat
atttcaagcaactgggaggtcttcttagaaatacttgatggaatagaaaagatgaaatcc
atgtcacaacttgctgttttatcaagacgatggaggccatcagagatgaaactagattct
ttccaggaagtagtgctagaaagcagcagtgttgaagaattaaaagagaagctgagcgaa
ataagtggaatacccttagaaaacatagaatttgcaaagggtagaggaacgtttccatgc
gacatttccatactagagattcaccaagacttggactggaatcctaaagtatctacattg
aatgtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaaact
gaagaattaatggaattaacagatgagcagagaaatgaactgatgaaaaaagaaagcagc
agactccagaaaactggacaccgggtaacctactctcctcgtaaagaaaaagcactaaaa
atttatctggatggagcaccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
